From a8ffb2c7ed135603f355054ac0c3795df100bfeb Mon Sep 17 00:00:00 2001
From: kedhammar <alfred.kedhammar@scilifelab.se>
Date: Thu, 14 Nov 2024 15:36:54 +0100
Subject: [PATCH] bugfix

---
 VERSIONLOG.md        | 4 ++++
 scripts/bravo_csv.py | 3 ++-
 2 files changed, 6 insertions(+), 1 deletion(-)

diff --git a/VERSIONLOG.md b/VERSIONLOG.md
index 0ecaaefe..c96d7baa 100644
--- a/VERSIONLOG.md
+++ b/VERSIONLOG.md
@@ -1,5 +1,9 @@
 # Scilifelab_epps Version Log
 
+## 20241114.1
+
+Bugfix Bravo CSV for qPCR. Needed better logic for isolating physical output artifacts.
+
 ## 20241108.1
 
 Add col for qPCR dilution vol
diff --git a/scripts/bravo_csv.py b/scripts/bravo_csv.py
index 3eec3496..ca1afa41 100644
--- a/scripts/bravo_csv.py
+++ b/scripts/bravo_csv.py
@@ -239,7 +239,8 @@ def compute_transfer_volume(currentStep, lims, log):
 def aliquot_fixed_volume(currentStep, lims, volume, log):
     data = []
     for inp, out in currentStep.input_output_maps:
-        if out["output-type"] == "ResultFile":
+        # Only act on output artifacts with a defined location
+        if out["uri"].location != (None, None):
             obj = {}
             obj["src_fc"] = (
                 inp["uri"].location[0].name.replace(",", "_").replace(" ", "_")