diff --git a/VERSIONLOG.md b/VERSIONLOG.md index c96d7baa..da67e885 100644 --- a/VERSIONLOG.md +++ b/VERSIONLOG.md @@ -1,5 +1,9 @@ # Scilifelab_epps Version Log +## 20241211.1 + +No longer reserve PromethION column 3 for Clinical Genomics. + ## 20241114.1 Bugfix Bravo CSV for qPCR. Needed better logic for isolating physical output artifacts. diff --git a/scripts/ont_suggest_ports.py b/scripts/ont_suggest_ports.py index c6d11902..509e5e55 100644 --- a/scripts/ont_suggest_ports.py +++ b/scripts/ont_suggest_ports.py @@ -42,9 +42,7 @@ def main(lims, args): # Sort ports (a sort of port sort, if you will) ports_list = list(ports.items()) - ports_list.sort( - key=lambda x: x[1] + 1000 if x[0][0] == "3" else x[1] - ) # Sort by port usage, but send column 3 to the end since it's reserved for Clinical Genomics + ports_list.sort(key=lambda x: x[1]) # Collect which ports are already specified in UDFs ports_used = []