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Install internal tools Python packages & run test suite

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Updates to NvFaidx, Fasta Noodles, and Sequence Accessor
Install internal tools Python packages & run test suite #768: Pull request #532 synchronize by skothenhill-nv
December 16, 2024 22:55 1m 2s hillst/iterate-fastas
December 16, 2024 22:55 1m 2s
Initial attempt for ESM-2 to NeMo checkpoint conversion
Install internal tools Python packages & run test suite #767: Pull request #537 opened by pstjohn
December 16, 2024 22:50 1m 3s pstjohn:pstjohn/hf-nemo-checkpoint-conversion
December 16, 2024 22:50 1m 3s
RowFeatureIndex Optimization
Install internal tools Python packages & run test suite #766: Pull request #531 synchronize by polinabinder1
December 16, 2024 22:12 1m 2s polinabinder/small_row_feat_index
December 16, 2024 22:12 1m 2s
RowFeatureIndex Optimization
Install internal tools Python packages & run test suite #765: Pull request #531 synchronize by polinabinder1
December 16, 2024 22:06 1m 4s polinabinder/small_row_feat_index
December 16, 2024 22:06 1m 4s
RowFeatureIndex Optimization
Install internal tools Python packages & run test suite #764: Pull request #531 synchronize by polinabinder1
December 16, 2024 21:45 1m 5s polinabinder/small_row_feat_index
December 16, 2024 21:45 1m 5s
RowFeatureIndex Optimization
Install internal tools Python packages & run test suite #763: Pull request #531 synchronize by polinabinder1
December 16, 2024 21:45 55s polinabinder/small_row_feat_index
December 16, 2024 21:45 55s
Flexible memory management to avoid fragmentation-related CUDA OOM
Install internal tools Python packages & run test suite #762: Pull request #524 synchronize by farhadrgh
December 16, 2024 21:07 54s farhadr/num_workers
December 16, 2024 21:07 54s
RowFeatureIndex Optimization
Install internal tools Python packages & run test suite #761: Pull request #531 synchronize by polinabinder1
December 16, 2024 20:01 54s polinabinder/small_row_feat_index
December 16, 2024 20:01 54s
Distributed Inference Support for ESM2/Geneformer (#482)
Install internal tools Python packages & run test suite #760: Commit c39b2d4 pushed by farhadrgh
December 16, 2024 19:51 55s main
December 16, 2024 19:51 55s
Update ddp config to improve ESM-2 15B MFU
Install internal tools Python packages & run test suite #759: Pull request #520 synchronize by sichu2023
December 16, 2024 19:11 1m 0s sichu/update-ddp-config
December 16, 2024 19:11 1m 0s
[DO NOT REVIEW AS A PR] little example of how we might use nemo-run for handling SLURM
Install internal tools Python packages & run test suite #758: Pull request #536 opened by skothenhill-nv
December 16, 2024 18:36 53s hillst/nemo-run-slurm
December 16, 2024 18:36 53s
Distributed Inference Support for ESM2/Geneformer
Install internal tools Python packages & run test suite #757: Pull request #482 synchronize by farhadrgh
December 16, 2024 18:30 55s farhadr/ddp_infer
December 16, 2024 18:30 55s
add initial configs for perf testing on ESM2 in JET (bionemo2)
Install internal tools Python packages & run test suite #756: Pull request #497 synchronize by dorotat-nv
December 16, 2024 18:16 55s dorotat/esm2-perf-jet-bionemo2
December 16, 2024 18:16 55s
add spawn cuda process testing
Install internal tools Python packages & run test suite #755: Pull request #535 opened by sichu2023
December 16, 2024 18:06 59s sichu/distributed_test
December 16, 2024 18:06 59s
Flexible memory management to avoid fragmentation-related CUDA OOM
Install internal tools Python packages & run test suite #754: Pull request #524 synchronize by farhadrgh
December 16, 2024 17:47 59s farhadr/num_workers
December 16, 2024 17:47 59s
Update ddp config to improve ESM-2 15B MFU
Install internal tools Python packages & run test suite #753: Pull request #520 synchronize by sichu2023
December 16, 2024 17:19 1m 3s sichu/update-ddp-config
December 16, 2024 17:19 1m 3s
Distributed Inference Support for ESM2/Geneformer
Install internal tools Python packages & run test suite #752: Pull request #482 synchronize by farhadrgh
December 16, 2024 17:07 54s farhadr/ddp_infer
December 16, 2024 17:07 54s
Update ddp config to improve ESM-2 15B MFU
Install internal tools Python packages & run test suite #751: Pull request #520 synchronize by sichu2023
December 16, 2024 16:59 1m 6s sichu/update-ddp-config
December 16, 2024 16:59 1m 6s
Distributed Inference Support for ESM2/Geneformer
Install internal tools Python packages & run test suite #750: Pull request #482 synchronize by farhadrgh
December 16, 2024 16:06 1m 31s farhadr/ddp_infer
December 16, 2024 16:06 1m 31s
Flexible memory management to avoid fragmentation-related CUDA OOM
Install internal tools Python packages & run test suite #749: Pull request #524 synchronize by farhadrgh
December 16, 2024 16:05 1m 27s farhadr/num_workers
December 16, 2024 16:05 1m 27s
Bump 3rdparty/NeMo from 06e6703 to 4ca4424
Install internal tools Python packages & run test suite #748: Pull request #534 opened by dependabot bot
December 16, 2024 14:58 1m 7s dependabot/submodules/main/3rdparty/NeMo-4ca4424
December 16, 2024 14:58 1m 7s
Bump 3rdparty/Megatron-LM from 99f23d2 to 71c394b
Install internal tools Python packages & run test suite #747: Pull request #533 opened by dependabot bot
December 16, 2024 14:58 1m 5s
Updates to NvFaidx, Fasta Noodles, and Sequence Accessor
Install internal tools Python packages & run test suite #746: Pull request #532 synchronize by skothenhill-nv
December 14, 2024 01:14 54s hillst/iterate-fastas
December 14, 2024 01:14 54s
Updates to NvFaidx, Fasta Noodles, and Sequence Accessor
Install internal tools Python packages & run test suite #745: Pull request #532 opened by skothenhill-nv
December 14, 2024 01:09 59s hillst/iterate-fastas
December 14, 2024 01:09 59s
Fully Integrate SCDL into Geneformer
Install internal tools Python packages & run test suite #744: Pull request #480 synchronize by polinabinder1
December 13, 2024 23:42 1m 23s savitha/integrate-scdl-geneformer-rebased
December 13, 2024 23:42 1m 23s