From 03853d027ab6fdcfbd3ae34ef9575404e1d1c720 Mon Sep 17 00:00:00 2001
From: TShapinsky <tobiasshapinsky@gmail.com>
Date: Fri, 26 Jul 2024 12:03:10 -0600
Subject: [PATCH] remove python dependencies that now live elsewhere

---
 alfalfa_worker/Dockerfile |  11 +-
 poetry.lock               | 884 +++++++++-----------------------------
 pyproject.toml            |   6 -
 3 files changed, 204 insertions(+), 697 deletions(-)

diff --git a/alfalfa_worker/Dockerfile b/alfalfa_worker/Dockerfile
index cb476254..90dda97e 100644
--- a/alfalfa_worker/Dockerfile
+++ b/alfalfa_worker/Dockerfile
@@ -5,13 +5,10 @@ USER root
 ENV HOME /alfalfa
 
 WORKDIR $HOME
-# Need to set the lang to use Python 3.8 with Poetry
-ENV LANG C.UTF-8
-ENV DEBIAN_FRONTEND noninteractive
 
 # Install poetry
-RUN pip3 install poetry==1.8.3
-RUN poetry config virtualenvs.options.system-site-packages true \
+RUN pip3 install poetry==1.8.3 \
+  && poetry config virtualenvs.options.system-site-packages true \
   && poetry config virtualenvs.create false
 
 # Copy and install poetry-based dependencies
@@ -22,9 +19,9 @@ COPY poetry.lock /alfalfa
 RUN poetry install --only main
 
 # Include the path to where alfalfa_worker is so that system calls can find it.
-ENV  PYTHONPATH="/alfalfa:${PYTHONPATH}"
+ENV  PYTHONPATH="${HOME}:${PYTHONPATH}"
 
-COPY ./alfalfa_worker /alfalfa/alfalfa_worker
+COPY ./alfalfa_worker ${HOME}/alfalfa_worker
 
 RUN pip3.8 install virtualenv \
   && pip3.8 install -r /alfalfa/alfalfa_worker/energyplus_requirements.txt
diff --git a/poetry.lock b/poetry.lock
index 8dfc3946..b86e72a8 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -307,13 +307,13 @@ crt = ["awscrt (==0.16.9)"]
 
 [[package]]
 name = "certifi"
-version = "2024.6.2"
+version = "2024.7.4"
 description = "Python package for providing Mozilla's CA Bundle."
 optional = false
 python-versions = ">=3.6"
 files = [
-    {file = "certifi-2024.6.2-py3-none-any.whl", hash = "sha256:ddc6c8ce995e6987e7faf5e3f1b02b302836a0e5d98ece18392cb1a36c72ad56"},
-    {file = "certifi-2024.6.2.tar.gz", hash = "sha256:3cd43f1c6fa7dedc5899d69d3ad0398fd018ad1a17fba83ddaf78aa46c747516"},
+    {file = "certifi-2024.7.4-py3-none-any.whl", hash = "sha256:c198e21b1289c2ab85ee4e67bb4b4ef3ead0892059901a8d5b622f24a1101e90"},
+    {file = "certifi-2024.7.4.tar.gz", hash = "sha256:5a1e7645bc0ec61a09e26c36f6106dd4cf40c6db3a1fb6352b0244e7fb057c7b"},
 ]
 
 [[package]]
@@ -518,136 +518,65 @@ traitlets = ">=4"
 [package.extras]
 test = ["pytest"]
 
-[[package]]
-name = "contourpy"
-version = "1.1.1"
-description = "Python library for calculating contours of 2D quadrilateral grids"
-optional = false
-python-versions = ">=3.8"
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-]
-
-[package.dependencies]
-numpy = {version = ">=1.16,<2.0", markers = "python_version <= \"3.11\""}
-
-[package.extras]
-bokeh = ["bokeh", "selenium"]
-docs = ["furo", "sphinx (>=7.2)", "sphinx-copybutton"]
-mypy = ["contourpy[bokeh,docs]", "docutils-stubs", "mypy (==1.4.1)", "types-Pillow"]
-test = ["Pillow", "contourpy[test-no-images]", "matplotlib"]
-test-no-images = ["pytest", "pytest-cov", "wurlitzer"]
-
 [[package]]
 name = "coverage"
-version = "7.5.4"
+version = "7.6.0"
 description = "Code coverage measurement for Python"
 optional = false
 python-versions = ">=3.8"
 files = [
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 [package.dependencies]
@@ -656,21 +585,6 @@ tomli = {version = "*", optional = true, markers = "python_full_version <= \"3.1
 [package.extras]
 toml = ["tomli"]
 
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-tests = ["pytest", "pytest-cov", "pytest-xdist"]
-
 [[package]]
 name = "debugpy"
 version = "1.8.2"
@@ -757,13 +671,13 @@ wmi = ["wmi (>=1.5.1)"]
 
 [[package]]
 name = "exceptiongroup"
-version = "1.2.1"
+version = "1.2.2"
 description = "Backport of PEP 654 (exception groups)"
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 python-versions = ">=3.7"
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 typing = ["typing-extensions (>=4.8)"]
 
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-
-[package.extras]
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-graphite = ["lz4 (>=1.7.4.2)"]
-interpolatable = ["munkres", "pycairo", "scipy"]
-lxml = ["lxml (>=4.0)"]
-pathops = ["skia-pathops (>=0.5.0)"]
-plot = ["matplotlib"]
-repacker = ["uharfbuzz (>=0.23.0)"]
-symfont = ["sympy"]
-type1 = ["xattr"]
-ufo = ["fs (>=2.2.0,<3)"]
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-woff = ["brotli (>=1.0.1)", "brotlicffi (>=0.8.0)", "zopfli (>=0.1.4)"]
-
 [[package]]
 name = "fqdn"
 version = "1.5.1"
@@ -947,13 +796,13 @@ socks = ["socksio (==1.*)"]
 
 [[package]]
 name = "identify"
-version = "2.5.36"
+version = "2.6.0"
 description = "File identification library for Python"
 optional = false
 python-versions = ">=3.8"
 files = [
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+    {file = "identify-2.6.0.tar.gz", hash = "sha256:cb171c685bdc31bcc4c1734698736a7d5b6c8bf2e0c15117f4d469c8640ae5cf"},
 ]
 
 [package.extras]
@@ -972,22 +821,22 @@ files = [
 
 [[package]]
 name = "importlib-metadata"
-version = "6.0.1"
+version = "8.2.0"
 description = "Read metadata from Python packages"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
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 [package.dependencies]
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 [package.extras]
-docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
+doc = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
 perf = ["ipython"]
-testing = ["flake8 (<5)", "flufl.flake8", "importlib-resources (>=1.3)", "packaging", "pyfakefs", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-flake8", "pytest-mypy (>=0.9.1)", "pytest-perf (>=0.9.2)"]
+test = ["flufl.flake8", "importlib-resources (>=1.3)", "jaraco.test (>=5.4)", "packaging", "pyfakefs", "pytest (>=6,!=8.1.*)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-mypy", "pytest-perf (>=0.9.2)", "pytest-ruff (>=0.2.1)"]
 
 [[package]]
 name = "importlib-resources"
@@ -1041,13 +890,13 @@ files = [
 
 [[package]]
 name = "ipykernel"
-version = "6.29.4"
+version = "6.29.5"
 description = "IPython Kernel for Jupyter"
 optional = false
 python-versions = ">=3.8"
 files = [
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 ]
 
 [package.dependencies]
@@ -1217,13 +1066,13 @@ files = [
 
 [[package]]
 name = "jsonschema"
-version = "4.22.0"
+version = "4.23.0"
 description = "An implementation of JSON Schema validation for Python"
 optional = false
 python-versions = ">=3.8"
 files = [
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+    {file = "jsonschema-4.23.0.tar.gz", hash = "sha256:d71497fef26351a33265337fa77ffeb82423f3ea21283cd9467bb03999266bc4"},
 ]
 
 [package.dependencies]
@@ -1240,11 +1089,11 @@ rfc3339-validator = {version = "*", optional = true, markers = "extra == \"forma
 rfc3986-validator = {version = ">0.1.0", optional = true, markers = "extra == \"format-nongpl\""}
 rpds-py = ">=0.7.1"
 uri-template = {version = "*", optional = true, markers = "extra == \"format-nongpl\""}
-webcolors = {version = ">=1.11", optional = true, markers = "extra == \"format-nongpl\""}
+webcolors = {version = ">=24.6.0", optional = true, markers = "extra == \"format-nongpl\""}
 
 [package.extras]
 format = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3987", "uri-template", "webcolors (>=1.11)"]
-format-nongpl = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3986-validator (>0.1.0)", "uri-template", "webcolors (>=1.11)"]
+format-nongpl = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3986-validator (>0.1.0)", "uri-template", "webcolors (>=24.6.0)"]
 
 [[package]]
 name = "jsonschema-specifications"
@@ -1390,13 +1239,13 @@ jupyter-server = ">=1.1.2"
 
 [[package]]
 name = "jupyter-server"
-version = "2.14.1"
+version = "2.14.2"
 description = "The backend—i.e. core services, APIs, and REST endpoints—to Jupyter web applications."
 optional = false
 python-versions = ">=3.8"
 files = [
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+    {file = "jupyter_server-2.14.2-py3-none-any.whl", hash = "sha256:47ff506127c2f7851a17bf4713434208fc490955d0e8632e95014a9a9afbeefd"},
+    {file = "jupyter_server-2.14.2.tar.gz", hash = "sha256:66095021aa9638ced276c248b1d81862e4c50f292d575920bbe960de1c56b12b"},
 ]
 
 [package.dependencies]
@@ -1445,13 +1294,13 @@ test = ["jupyter-server (>=2.0.0)", "pytest (>=7.0)", "pytest-jupyter[server] (>
 
 [[package]]
 name = "jupyterlab"
-version = "4.2.3"
+version = "4.2.4"
 description = "JupyterLab computational environment"
 optional = false
 python-versions = ">=3.8"
 files = [
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-    {file = "jupyterlab-4.2.3.tar.gz", hash = "sha256:df6e46969ea51d66815167f23d92f105423b7f1f06fa604d4f44aeb018c82c7b"},
+    {file = "jupyterlab-4.2.4-py3-none-any.whl", hash = "sha256:807a7ec73637744f879e112060d4b9d9ebe028033b7a429b2d1f4fc523d00245"},
+    {file = "jupyterlab-4.2.4.tar.gz", hash = "sha256:343a979fb9582fd08c8511823e320703281cd072a0049bcdafdc7afeda7f2537"},
 ]
 
 [package.dependencies]
@@ -1477,7 +1326,7 @@ dev = ["build", "bump2version", "coverage", "hatch", "pre-commit", "pytest-cov",
 docs = ["jsx-lexer", "myst-parser", "pydata-sphinx-theme (>=0.13.0)", "pytest", "pytest-check-links", "pytest-jupyter", "sphinx (>=1.8,<7.3.0)", "sphinx-copybutton"]
 docs-screenshots = ["altair (==5.3.0)", "ipython (==8.16.1)", "ipywidgets (==8.1.2)", "jupyterlab-geojson (==3.4.0)", "jupyterlab-language-pack-zh-cn (==4.1.post2)", "matplotlib (==3.8.3)", "nbconvert (>=7.0.0)", "pandas (==2.2.1)", "scipy (==1.12.0)", "vega-datasets (==0.9.0)"]
 test = ["coverage", "pytest (>=7.0)", "pytest-check-links (>=0.7)", "pytest-console-scripts", "pytest-cov", "pytest-jupyter (>=0.5.3)", "pytest-timeout", "pytest-tornasync", "requests", "requests-cache", "virtualenv"]
-upgrade-extension = ["copier (>=8,<10)", "jinja2-time (<0.3)", "pydantic (<2.0)", "pyyaml-include (<2.0)", "tomli-w (<2.0)"]
+upgrade-extension = ["copier (>=9,<10)", "jinja2-time (<0.3)", "pydantic (<3.0)", "pyyaml-include (<3.0)", "tomli-w (<2.0)"]
 
 [[package]]
 name = "jupyterlab-pygments"
@@ -1492,13 +1341,13 @@ files = [
 
 [[package]]
 name = "jupyterlab-server"
-version = "2.27.2"
+version = "2.27.3"
 description = "A set of server components for JupyterLab and JupyterLab like applications."
 optional = false
 python-versions = ">=3.8"
 files = [
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-    {file = "jupyterlab_server-2.27.2.tar.gz", hash = "sha256:15cbb349dc45e954e09bacf81b9f9bcb10815ff660fb2034ecd7417db3a7ea27"},
+    {file = "jupyterlab_server-2.27.3-py3-none-any.whl", hash = "sha256:e697488f66c3db49df675158a77b3b017520d772c6e1548c7d9bcc5df7944ee4"},
+    {file = "jupyterlab_server-2.27.3.tar.gz", hash = "sha256:eb36caca59e74471988f0ae25c77945610b887f777255aa21f8065def9e51ed4"},
 ]
 
 [package.dependencies]
@@ -1527,119 +1376,6 @@ files = [
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+core = ["importlib-metadata (>=6)", "importlib-resources (>=5.10.2)", "jaraco.text (>=3.7)", "more-itertools (>=8.8)", "ordered-set (>=3.1.1)", "packaging (>=24)", "platformdirs (>=2.6.2)", "tomli (>=2.0.1)", "wheel (>=0.43.0)"]
+doc = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "pygments-github-lexers (==0.0.5)", "pyproject-hooks (!=1.1)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-favicon", "sphinx-inline-tabs", "sphinx-lint", "sphinx-notfound-page (>=1,<2)", "sphinx-reredirects", "sphinxcontrib-towncrier"]
+test = ["build[virtualenv] (>=1.0.3)", "filelock (>=3.4.0)", "importlib-metadata", "ini2toml[lite] (>=0.14)", "jaraco.develop (>=7.21)", "jaraco.envs (>=2.2)", "jaraco.path (>=3.2.0)", "jaraco.test", "mypy (==1.11.*)", "packaging (>=23.2)", "pip (>=19.1)", "pyproject-hooks (!=1.1)", "pytest (>=6,!=8.1.*)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-home (>=0.5)", "pytest-mypy", "pytest-perf", "pytest-ruff (<0.4)", "pytest-ruff (>=0.2.1)", "pytest-ruff (>=0.3.2)", "pytest-subprocess", "pytest-timeout", "pytest-xdist (>=3)", "tomli", "tomli-w (>=1.0.0)", "virtualenv (>=13.0.0)", "wheel"]
 
 [[package]]
 name = "six"
@@ -3222,42 +2785,6 @@ pure-eval = "*"
 [package.extras]
 tests = ["cython", "littleutils", "pygments", "pytest", "typeguard"]
 
-[[package]]
-name = "symfit"
-version = "0.5.6"
-description = "Symbolic Fitting; fitting as it should be."
-optional = false
-python-versions = "*"
-files = [
-    {file = "symfit-0.5.6-py2.py3-none-any.whl", hash = "sha256:5fec287e0ee28f5e6fe3fbd362398a7e35b8f3d5a2babd388e9780d00631c00e"},
-    {file = "symfit-0.5.6.tar.gz", hash = "sha256:b8c97aa96f7e4a385adf8e22d532712e12be4ef845ec18b817e45efdc69eadf4"},
-]
-
-[package.dependencies]
-numpy = ">=1.12"
-scipy = ">=1.0"
-setuptools = "*"
-sympy = ">=1.2"
-toposort = "*"
-
-[package.extras]
-all = ["matplotlib (>=2.0)"]
-contrib = ["matplotlib (>=2.0)"]
-
-[[package]]
-name = "sympy"
-version = "1.12.1"
-description = "Computer algebra system (CAS) in Python"
-optional = false
-python-versions = ">=3.8"
-files = [
-    {file = "sympy-1.12.1-py3-none-any.whl", hash = "sha256:9b2cbc7f1a640289430e13d2a56f02f867a1da0190f2f99d8968c2f74da0e515"},
-    {file = "sympy-1.12.1.tar.gz", hash = "sha256:2877b03f998cd8c08f07cd0de5b767119cd3ef40d09f41c30d722f6686b0fb88"},
-]
-
-[package.dependencies]
-mpmath = ">=1.1.0,<1.4.0"
-
 [[package]]
 name = "terminado"
 version = "0.18.1"
@@ -3308,17 +2835,6 @@ files = [
     {file = "tomli-2.0.1.tar.gz", hash = "sha256:de526c12914f0c550d15924c62d72abc48d6fe7364aa87328337a31007fe8a4f"},
 ]
 
-[[package]]
-name = "toposort"
-version = "1.10"
-description = "Implements a topological sort algorithm."
-optional = false
-python-versions = "*"
-files = [
-    {file = "toposort-1.10-py3-none-any.whl", hash = "sha256:cbdbc0d0bee4d2695ab2ceec97fe0679e9c10eab4b2a87a9372b929e70563a87"},
-    {file = "toposort-1.10.tar.gz", hash = "sha256:bfbb479c53d0a696ea7402601f4e693c97b0367837c8898bc6471adfca37a6bd"},
-]
-
 [[package]]
 name = "tornado"
 version = "6.4.1"
@@ -3508,4 +3024,4 @@ test = ["big-O", "importlib-resources", "jaraco.functools", "jaraco.itertools",
 [metadata]
 lock-version = "2.0"
 python-versions = ">=3.8, <3.11"
-content-hash = "d4c65d414e2de9bb77a361179ea3ac0ce3f20d8d6774d8dc3c96aab07550a113"
+content-hash = "fc820fe99127d7fc2648e7e4cb780fb33b8213a634ea79ba5418e3cfb7e121ac"
diff --git a/pyproject.toml b/pyproject.toml
index 1785560a..afdb8eca 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -18,17 +18,11 @@ authors = [
 python = ">=3.8, <3.11"
 
 boto3 = "~1.26"
-importlib-metadata = "~6.0"
 mlep = "0.1.1.dev3"
 mongoengine = "~0.25"
 pandas = "~1.5"
 redis = "~4.5"
 scipy = "1.9.3"
-symfit = "^0.5.5"
-
-# These libraries are used for the data generator/testcase.
-# Lock to pillow 9.1.1 to avoid installation issues with Pillow 9.2 on Ubuntu
-matplotlib = "3.6.2"
 
 # The influxdb dependency will be removed once filebeat is configured
 influxdb = "^5.3.1"