where is file "read_GDSC "?

[amssljc]

Thanks for your work!. When I run GSDC cross validation module, there was an error:

Traceback (most recent call last):
  File "GDSC_TCGA_cross_validation_with_combat.py", line 65, in <module>
    from read_GDSC import read_GDSC_drug_response
ModuleNotFoundError: No module named 'read_GDSC'

I cannot find any file named "read_GDSC" in your project. It seems you uploaded an earlier version of deep learning cv fold. Could you please update your code to make it work?

[saroudant]

Hi @amssljc,

Thanks a lot for your issue and sorry for the late reply.

This is indeed a typo and forgot to upload a new version, replacing the faulted line by
from read_GDSC_response import read_GDSC_drug_response
should work. Let me know if you are still running into issues, I will commit the change tonight (CET).

Best,
Soufiane