From d871aabf63e6f7f75641b39874fd985c372ad5e2 Mon Sep 17 00:00:00 2001
From: Valeriu Predoi <valeriu.predoi@gmail.com>
Date: Tue, 9 Jul 2024 16:33:44 +0100
Subject: [PATCH 1/7] add gitignore file

---
 .gitignore | 2 ++
 1 file changed, 2 insertions(+)
 create mode 100644 .gitignore

diff --git a/.gitignore b/.gitignore
new file mode 100644
index 0000000..2143a6f
--- /dev/null
+++ b/.gitignore
@@ -0,0 +1,2 @@
+s3v.egg-info
+s3v/__pycache__

From b0a4cf5cfdd4c5737d07213cd81394581248ac4b Mon Sep 17 00:00:00 2001
From: Valeriu Predoi <valeriu.predoi@gmail.com>
Date: Tue, 9 Jul 2024 16:47:32 +0100
Subject: [PATCH 2/7] add conda nev file

---
 environment.yml | 11 +++++++++++
 1 file changed, 11 insertions(+)
 create mode 100644 environment.yml

diff --git a/environment.yml b/environment.yml
new file mode 100644
index 0000000..ad63ada
--- /dev/null
+++ b/environment.yml
@@ -0,0 +1,11 @@
+---
+name: s3view
+channels:
+  - conda-forge
+  - nodefaults
+
+dependencies:
+  - cmd2 >1
+  - cf-python >=3.16.2  # 3.17.0 n/a yet on conda-forge
+  - minio
+  - python >=3.10

From 30fd6eb30cc60283e42a4c86ef8a87173f8b5fba Mon Sep 17 00:00:00 2001
From: Valeriu Predoi <valeriu.predoi@gmail.com>
Date: Tue, 9 Jul 2024 16:47:44 +0100
Subject: [PATCH 3/7] update setup file

---
 setup.py | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/setup.py b/setup.py
index 3c335ad..45c9254 100644
--- a/setup.py
+++ b/setup.py
@@ -9,6 +9,8 @@
     scripts=['s3v/s3view'], 
     install_requires = [
         'cmd2>2',
+        'cf-python>=3.16.2',  # 3.17 n/a yet on PyPI
+        'minio',
         'pyreadline3;platform_system=="Windows"'
         ]
-    )
\ No newline at end of file
+    )

From 6bcad42e24bebed76807694d8bbc47e3e250af71 Mon Sep 17 00:00:00 2001
From: Valeriu Predoi <valeriu.predoi@gmail.com>
Date: Tue, 9 Jul 2024 16:47:57 +0100
Subject: [PATCH 4/7] add barebones GA test

---
 .github/workflows/run-tests.yml | 48 +++++++++++++++++++++++++++++++++
 1 file changed, 48 insertions(+)
 create mode 100644 .github/workflows/run-tests.yml

diff --git a/.github/workflows/run-tests.yml b/.github/workflows/run-tests.yml
new file mode 100644
index 0000000..29c12ba
--- /dev/null
+++ b/.github/workflows/run-tests.yml
@@ -0,0 +1,48 @@
+
+name: Test
+
+on:
+  push:
+    branches:
+      - main
+  pull_request:
+    branches:
+      - main
+  schedule:
+    - cron: '0 0 * * *'  # nightly
+
+# Required shell entrypoint to have properly configured bash shell
+defaults:
+  run:
+    shell: bash -l {0}
+
+jobs:
+  linux:
+    runs-on: "ubuntu-latest"
+    strategy:
+      matrix:
+        python-version: ["3.10", "3.11", "3.12"]
+      fail-fast: false
+    name: Linux Python ${{ matrix.python-version }}
+    steps:
+      - uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
+      - uses: conda-incubator/setup-miniconda@v3
+        with:
+          activate-environment: s3view
+          environment-file: environment.yml
+          python-version: ${{ matrix.python-version }}
+          miniforge-version: "latest"
+          miniforge-variant: Mambaforge
+          use-mamba: true
+      - run: conda --version
+      - run: python -V
+      - run: conda list
+      - run: pip install -e .
+      - run: conda list
+      - run: which s3view
+      - run: s3view --help
+      # turn these on when they will be needed
+      # - run: flake8
+      # - run: pytest -n 2

From 3d11bf4bba7d40d1ffef7ed526049ff3dd35d33c Mon Sep 17 00:00:00 2001
From: Valeriu Predoi <valeriu.predoi@gmail.com>
Date: Fri, 12 Jul 2024 15:59:33 +0100
Subject: [PATCH 5/7] use development package of cf-python

---
 environment.yml | 9 ++++++++-
 1 file changed, 8 insertions(+), 1 deletion(-)

diff --git a/environment.yml b/environment.yml
index ad63ada..b9781b8 100644
--- a/environment.yml
+++ b/environment.yml
@@ -6,6 +6,13 @@ channels:
 
 dependencies:
   - cmd2 >1
-  - cf-python >=3.16.2  # 3.17.0 n/a yet on conda-forge
+  # use for conda-forge package, when available
+  # - cf-python >=3.17.0
   - minio
+  - pip
   - python >=3.10
+  # needed by cf-python; not in cf-python PyPI/git recipe
+  # remove when using conda-forge cf-python
+  - udunits2
+  - pip:
+    - git+https://github.com/NCAS-CMS/cf-python@main  # edit branch here

From a8f161193bc688bf1e381bb3bcd5844909519f2d Mon Sep 17 00:00:00 2001
From: Valeriu Predoi <valeriu.predoi@gmail.com>
Date: Fri, 12 Jul 2024 16:09:00 +0100
Subject: [PATCH 6/7] correct pointer to development branch of cfdm

---
 environment.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/environment.yml b/environment.yml
index b9781b8..30042e5 100644
--- a/environment.yml
+++ b/environment.yml
@@ -15,4 +15,4 @@ dependencies:
   # remove when using conda-forge cf-python
   - udunits2
   - pip:
-    - git+https://github.com/NCAS-CMS/cf-python@main  # edit branch here
+    - git+https://github.com/davidhassell/cfdm.git@h5-read-hdf5-chunks-hack

From e8ba2509ac73fc7211a2ef00929bec39805d43ae Mon Sep 17 00:00:00 2001
From: Valeriu Predoi <valeriu.predoi@gmail.com>
Date: Mon, 21 Oct 2024 15:01:18 +0100
Subject: [PATCH 7/7] retire mambaforge

---
 .github/workflows/run-tests.yml | 1 -
 1 file changed, 1 deletion(-)

diff --git a/.github/workflows/run-tests.yml b/.github/workflows/run-tests.yml
index 29c12ba..5bb6564 100644
--- a/.github/workflows/run-tests.yml
+++ b/.github/workflows/run-tests.yml
@@ -34,7 +34,6 @@ jobs:
           environment-file: environment.yml
           python-version: ${{ matrix.python-version }}
           miniforge-version: "latest"
-          miniforge-variant: Mambaforge
           use-mamba: true
       - run: conda --version
       - run: python -V