diff --git a/.Rbuildignore b/.Rbuildignore index a8b5434..1e2eab4 100644 --- a/.Rbuildignore +++ b/.Rbuildignore @@ -7,5 +7,6 @@ ^pkgdown$ ^CONTRIBUTING.md$ +^CITATION.cff$ ^doc$ ^Meta$ diff --git a/CITATION.cff b/CITATION.cff new file mode 100644 index 0000000..cd48ccb --- /dev/null +++ b/CITATION.cff @@ -0,0 +1,49 @@ +# This CITATION.cff file was generated with cffinit. +# Visit https://bit.ly/cffinit to generate yours today! + +cff-version: 1.2.0 +title: >- + StratPal: R package for stratigraphic paleobiology + modeling pipelines +message: >- + If you use this software, please cite it using the + metadata from this file. +type: software +authors: + - given-names: Niklas + family-names: Hohmann + email: N.H.Hohmann@uu.nl + affiliation: Utrecht University + orcid: 'https://orcid.org/0000-0003-1559-1838' +identifiers: + - type: doi + value: 10.5281/zenodo.12790995 + description: DOI of version 0.1.0 +repository-code: 'https://github.com/MindTheGap-ERC/StratPal' +url: 'https://mindthegap-erc.github.io/StratPal/' +repository: 'https://zenodo.org/doi/10.5281/zenodo.10782634' +abstract: >- + The fossil record is a joint expression of ecological, + taphonomic, evolutionary, and stratigraphic processes + (Holland and Patzkowsky, 2012). This package allowing to + simulate biological processes in the time domain (e.g., + trait evolution, fossil abundance), and examine how their + expression in the rock record (stratigraphic domain) is + influenced based on age-depth models, ecological niche + models, and taphonomic effects. Functions simulating + common processes used in modeling trait evolution or event + type data such as first/last occurrences are provided and + can be used standalone or as part of a pipeline. The + package comes with example data sets and tutorials in + several vignettes, which can be used as a template to set + up one's own simulation. +keywords: + - Stratigraphic Paleobiology + - Stratigraphy + - Paleontology + - Palaeontology + - Paleobiology +license: Apache-2.0 +commit: d476968672d99001c2485763f0f4fdc7b9458973 +version: 0.1.0 +date-released: '2024-07-22' diff --git a/README.md b/README.md index fa11af7..e2859eb 100644 --- a/README.md +++ b/README.md @@ -73,6 +73,14 @@ Apache 2.0, see LICENSE file for license text. Copyright 2024 Netherlands eScience Center and Utrecht University +## Citation + +To cite the package, please use + +- Hohmann, Niklas. 2024. "StratPal: R package for stratigraphic paleobiology modeling pipelines (v0.1.0)." Zenodo. . + +Alternatively, you can also use the CITATION.cff file at the root of the repository, or `citation("StratPal")`. + ## References {#References} - Holland, Steven M. and Patzkowsky, Mark E. "Stratigraphic Paleobiology : Understanding the Distribution of Fossil Taxa in Time and Space."" The University of Chicago Press; 2012.