fcm-make configuration for an LFRic-Apps suite on Monsoon

[dennissergeev]

Hello,

I was wondering if anyone could help me with setting up fcm-make keywords for a standalone LFRic-Apps suite on Monsoon please. The suite is u-dg617.

At the start of fcm_make_lfric task, I get the following error:

[FAIL] https://code.metoffice.gov.uk/svn/lfric_apps/main/[email protected]: revision keyword not defined

[FAIL] fcm make -f /scratch/d03/deser/cylc-run/u-dg617/run1/work/19880901T0000Z/fcm_make_lfric/fcm-make.cfg -C /home/d03/deser/cylc-run/u-dg617/run1/share/fcm_make_lfric -j 1 --ignore-lock # return-code=2
2024-05-30T11:42:10Z CRITICAL - failed/ERR

Contents of app/fcm_make_lfric/rose-app.conf

meta=fcm_make
mode=fcm_make
opt.jobs=1

[env]
[email protected]
lfric_apps_sources=branches/pkg/Config/vn1.0_gc5lfric_package@1265
[email protected]
lfric_core_sources=branches/pkg/Config/apps1.0_gc5lfric_package@50299

I also tried setting lfric_apps_rev=@782 but it results in

[FAIL] https://code.metoffice.gov.uk/svn/lfric_apps/main/trunk@782: not found

Contents of app/fcm_make_lfric/file/fcm-make.cfg

steps = extract

extract.ns = lfric_apps lfric_core

extract.location{primary}[lfric_apps] = fcm:lfric_apps.x
extract.location[lfric_apps] = trunk$lfric_apps_rev
extract.location{diff}[lfric_apps] = $lfric_apps_sources

extract.location{primary}[lfric_core] = fcm:lfric.x
extract.location[lfric_core] = trunk$lfric_core_rev
extract.location{diff}[lfric_core] = $lfric_core_sources

As a test, these commands work fine though, so I don't know what is wrong with the config files above:

fcm ls https://code.metoffice.gov.uk/svn/lfric_apps/main/[email protected]
fcm ls fcm:lfric_apps.x/[email protected]

Thanks,
Denis

[dpmatthews]

You can't access SRS (code.metoffice.gov.uk) repositories directly in tasks due to the need to authenticate. Instead you need to use mirrors which we maintain on Monsoon (updated every 5 minutes). To do this change fcm:lfric.x to fcm:lfric.xm and fcm:lfric_apps.x to fcm:lfric_apps.xm.
(I've just setup the lfric_apps mirror on Monsoon)

[dennissergeev]

Many thanks @dpmatthews! This solved the problem.

[dennissergeev]

@dpmatthews Another question if I may. Why do I get this error: RAMTMP: unbound variable?

It's used in the mesh and lfric_atm compile tasks in flow.cylc:

./flow.cylc:  {% set FASTMEM = "\$RAMTMP" %}
./flow.cylc:  {% set FASTMEM = "\$RAMTMP" %}
./flow.cylc:            WORKING_DIR          = $RAMTMP/mesh_tools
./flow.cylc:            WORKING_DIR          = $RAMTMP/lfric_atm

[dpmatthews]

RAMTMP is defined for PBS jobs which have requested a RAM drive: https://code.metoffice.gov.uk/doc/monsoon2/bestPractice.html#memory-resident-temporary-file-system-ram-drive
However, you are currently running these jobs as background jobs on the login node rather than via PBS.

[dennissergeev]

ah okay thanks!