diff --git a/DESCRIPTION b/DESCRIPTION index d73d797..f4020ff 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,7 +1,7 @@ Package: Canek Type: Package Title: Batch Correction of Single Cell Transcriptome Data -Version: 0.2.4 +Version: 0.2.5 Authors@R: c( person("Martin", "Loza", email = "martin.loza.lopez@gmail.com", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-3342-2643")), diff --git a/NEWS.md b/NEWS.md index 771bab7..2aab8dc 100644 --- a/NEWS.md +++ b/NEWS.md @@ -1,3 +1,9 @@ +# Canek 0.2.5 + +## Changes + +- Update unit tests for compatibility with changes in igraph ([#24](https://github.com/MartinLoza/Canek/issues/24)). + # Canek 0.2.4 ## Changes diff --git a/tests/testthat/test-Clustering.R b/tests/testthat/test-Clustering.R index 43deb66..346920f 100644 --- a/tests/testthat/test-Clustering.R +++ b/tests/testthat/test-Clustering.R @@ -9,13 +9,13 @@ dataLouvain <- y$`B2/B1`$`Correction Data`$Clusters test_that("Clustering with kmeans works", { expect_false(is.null(dataKmeans)) expect_equal(names(dataKmeans), c("cluster", "centers")) - expect_equal(as.integer(table(dataKmeans$cluster)), 631) + expect_equal(length(dataKmeans$cluster), 631) expect_equal(dim(dataKmeans$centers), c(1, 10)) }) test_that("Clustering with louvain works", { expect_false(is.null(dataLouvain)) expect_equal(names(dataLouvain), c("cluster", "centers")) - expect_equal(as.integer(table(dataLouvain$cluster)), c(96, 125, 140, 171, 99)) - expect_equal(dim(dataLouvain$centers), c(5, 10)) + expect_equal(length(dataLouvain$cluster), 631) + expect_equal(ncol(dataLouvain$centers), 10) })