project-tests.yaml

name: project tests

on:
  pull_request:
    types:
      - opened
      - reopened
      - synchronize
      - ready_for_review
  push:
    branches:
      - main

jobs:
  changes:
    runs-on: ubuntu-latest
    outputs:
      projects: ${{ steps.filter.outputs.changes }}
    steps:
    - name: Checkout repository
      uses: actions/checkout@v2
    - name: Filter project changes
      id: filter 
      uses: dorny/paths-filter@v2
      with:
        filters: .github/project-filters.yaml
      if: github.event.pull_request.draft == false

  tests:
    runs-on: ubuntu-latest
    needs: changes
    strategy:
      fail-fast: false
      matrix:
        project: ${{ fromJSON(needs.changes.outputs.projects) }}
        exclude:
          - project: 'workflow' # Fixed the exclusion key
    permissions:
      packages: read
    container:
      image: quay.io/singularity/singularity:v3.8.1
      options: --privileged
    steps:
      - name: Checkout repository
        uses: actions/checkout@v4
        with:
          submodules: recursive

      - name: Build Apptainer image
        run: |
          cd ${{ matrix.project }}
          apptainer build --fakeroot ${matrix.project}.sif apptainer.def

      - name: Run tests in Apptainer container
        run: |
          apptainer exec --fakeroot ${matrix.project}.sif poetry run pytest