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ci.yaml
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name: "CI"
on:
pull_request:
branches:
- main
push:
branches:
- main
schedule:
# At 07:00 UTC on Monday and Thursday.
- cron: "0 7 * * 1,4"
concurrency:
# Cancel out any previous workflows within the same PR
group: "${{ github.ref }}-${{ github.head_ref }}-${{ github.workflow }}"
cancel-in-progress: True
defaults:
run:
shell: bash -l {0}
jobs:
tests:
runs-on: ${{ matrix.OS }}-latest
name: "tests"
strategy:
fail-fast: False
matrix:
os: ['ubuntu', 'macos', 'windows']
python-version: ['3.9', '3.10', '3.11']
steps:
- uses: actions/checkout@v3
- uses: conda-incubator/setup-miniconda@v2
with:
auto-update-conda: True
use-mamba: True
python-version: ${{ matrix.python-version }}
miniforge-variant: Mambaforge
environment-file: environment.yml
activate-environment: mdml_workshop
- name: "environment information"
run: |
mamba info -a
mamba list
- name: "run MD notebooks tests"
run: |
pytest -v --nbval-lax MD
- name: "run ML notebooks tests"
run: |
pytest -v --nbval-lax ML