diff --git a/vignettes/recount-workflow.Rmd b/vignettes/recount-workflow.Rmd index cd44a26..2191b4e 100644 --- a/vignettes/recount-workflow.Rmd +++ b/vignettes/recount-workflow.Rmd @@ -756,6 +756,7 @@ length(regions) ## Remove file we no longer need unlink("SRP045638/bw", recursive = TRUE) +stopifnot(!file.exists("SRP045638/bw/mean_SRP045638.bw")) ``` Now that we have a set of regions to work with, we proceed to build a _RangedSummarizedExperiment_ object with the coverage counts, add the expanded metadata we built for the gene-level, and scale the counts. Note that `coverage_matrix()` scales the base-pair coverage counts by default, which we turn off in order to use use `scale_counts()`.