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From bam to UMIs and cell filter #1

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isshamie opened this issue Feb 4, 2020 · 1 comment
Open

From bam to UMIs and cell filter #1

isshamie opened this issue Feb 4, 2020 · 1 comment

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@isshamie
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isshamie commented Feb 4, 2020

Can we use the cellranger toolkit to get the cells to filter out?
Need to use bam2fastq since our downloaded fastq is not complete.

@isshamie
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isshamie commented Feb 4, 2020

git commit helps to do this. 00d9776

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