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Support for fastq and zipped fastq files for count module #3

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ffinfo opened this issue Apr 2, 2015 · 0 comments
Open

Support for fastq and zipped fastq files for count module #3

ffinfo opened this issue Apr 2, 2015 · 0 comments

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@ffinfo
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ffinfo commented Apr 2, 2015

Right now there is need to first convert fastq files to fasta files to make a kmer profile. It would be nice if kpal support this without first converting.
Extensions that would be nice to support:

  • *.fastq
  • *.fastq.gz
  • *.fq
  • *.fq.gz
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