diff --git a/.gitmodules b/.gitmodules index 54cf7dc..ff27b7a 100644 --- a/.gitmodules +++ b/.gitmodules @@ -6,7 +6,3 @@ path = tasks url = https://github.com/biowdl/tasks.git branch = develop -[submodule "scripts"] - path = scripts - url = https://github.com/biowdl/scripts.git - branch = develop diff --git a/CHANGELOG.md b/CHANGELOG.md index 5acc360..958cb5e 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -10,6 +10,7 @@ that users understand how the changes affect the new version. v2.0.0-dev --------------------------- ++ Move pipeline out of BioWDL. + Make g.vcf output optional, because generating a g.vcf with DeepVariant is extremely slow. This changes the default behaviour. diff --git a/scripts b/scripts deleted file mode 160000 index 325a129..0000000 --- a/scripts +++ /dev/null @@ -1 +0,0 @@ -Subproject commit 325a129c14de56b2055ee0e9e0da7dc74df5fec4