Created 2 groups in STUDY but limo_batch only created one set of .txt file list for LIMO, betas etc...

[arnodelorme]

I can investigate why, but I am not sure it is worth the effort.

There are several categorical variables that one might want to use patient/control, male/female. I think my solution of regenerating the text files dynamically when the user chooses the second level categorical variables makes more sense.

[CPernet]

we could functionalize the bit of code that does that (pick-up group variables, read txt file for all subjects, generate some tmp)

the problem is where the group selection should take place? you may want to do a one sample on one sub group only, or combine variables to create eg 4 groups (patient/control, male/female) in your ANOVA

[arnodelorme]

Right now, I imagine group selection to take place when you run ANOVA and ANCOVA - so same place it is right now. We can always change it later. Arno

…

On Sep 16, 2022, at 11:02 AM, Cyril Pernet ***@***.***> wrote: we could functionalize the bit of code that does that (pick-up group variables, read txt file for all subjects, generate some tmp) the problem is where the group selection should take place? you may want to do a one sample on one sub group only, or combine variables to create eg 4 groups (patient/control, male/female) in your ANOVA — Reply to this email directly, view it on GitHub, or unsubscribe. You are receiving this because you authored the thread.