diff --git a/src/jvm/main/org/jetbrains/kotlinx/lincheck/transformation/LincheckJavaAgent.kt b/src/jvm/main/org/jetbrains/kotlinx/lincheck/transformation/LincheckJavaAgent.kt
index 0038f4977..bff4751a4 100644
--- a/src/jvm/main/org/jetbrains/kotlinx/lincheck/transformation/LincheckJavaAgent.kt
+++ b/src/jvm/main/org/jetbrains/kotlinx/lincheck/transformation/LincheckJavaAgent.kt
@@ -252,6 +252,11 @@ internal object LincheckJavaAgent {
      * @param processedObjects A set of processed objects to avoid infinite recursion.
      */
     private fun ensureObjectIsTransformed(obj: Any, processedObjects: MutableSet<Any>) {
+        if (obj is Array<*>) {
+            obj.filterNotNull().forEach { ensureObjectIsTransformed(it, processedObjects) }
+            return
+        }
+
         if (!instrumentation.isModifiableClass(obj.javaClass) || !shouldTransform(obj.javaClass.name, instrumentationMode)) {
             return
         }
diff --git a/src/jvm/test/org/jetbrains/kotlinx/lincheck_test/verifier/linearizability/CounterTests.kt b/src/jvm/test/org/jetbrains/kotlinx/lincheck_test/verifier/linearizability/CounterTests.kt
index 415561228..0a4685c43 100644
--- a/src/jvm/test/org/jetbrains/kotlinx/lincheck_test/verifier/linearizability/CounterTests.kt
+++ b/src/jvm/test/org/jetbrains/kotlinx/lincheck_test/verifier/linearizability/CounterTests.kt
@@ -27,6 +27,7 @@ class CounterCorrectTest : AbstractCounterTest(CounterCorrect())
 class CounterWrong0Test : AbstractCounterTest(CounterWrong0(), IncorrectResultsFailure::class)
 class CounterWrong1Test : AbstractCounterTest(CounterWrong1(), IncorrectResultsFailure::class)
 class CounterWrong2Test : AbstractCounterTest(CounterWrong2(), IncorrectResultsFailure::class)
+class CounterWithArrayWrongTest : AbstractCounterTest(CounterWithArrayWrong(), IncorrectResultsFailure::class)
 
 interface Counter {
     fun incAndGet(): Int
@@ -58,6 +59,20 @@ private class CounterWrong2 : Counter {
     override fun get(): Int = c
 }
 
+private class CounterWithArrayWrong : Counter {
+    private var counter = arrayOf(CounterImpl())
+
+    override fun incAndGet(): Int = counter[0].incAndGet()
+    override fun get(): Int = counter[0].get()
+
+    private class CounterImpl {
+        private var c: Int = 0
+
+        fun incAndGet(): Int = ++c
+        fun get(): Int = c
+    }
+}
+
 private class CounterCorrect : Counter {
     private val c = AtomicInteger()