From d33d517ca5ebcb1ea6a136a8d963ee3f4fbd3524 Mon Sep 17 00:00:00 2001
From: Ciara Donegan <82416895+ciara-donegan@users.noreply.github.com>
Date: Mon, 18 Sep 2023 10:45:44 -0400
Subject: [PATCH] formatting changes

mainly just changed some formatting since last commit
---
 h2/components/modules/mod_graph.R   |  1 +
 h2/components/modules/mod_run.R     | 69 +++++++++--------------------
 h2/components/modules/mod_summary.r | 10 ++---
 h2/global.r                         |  1 +
 4 files changed, 27 insertions(+), 54 deletions(-)

diff --git a/h2/components/modules/mod_graph.R b/h2/components/modules/mod_graph.R
index 235d0b7..0362f3e 100644
--- a/h2/components/modules/mod_graph.R
+++ b/h2/components/modules/mod_graph.R
@@ -14,6 +14,7 @@ graph_server <- function(id, r6, i) {
     observe({
       filtered_output <-
         filter(r6$output[[i() - 1]], variable == "CO2_concentration") #i increases at end of mod_run so output is i-1
+        #filter(bind_rows(r6$output), variable == "CO2_concentration")
       output$graph <- renderPlotly({
         plot_ly(
           filtered_output,
diff --git a/h2/components/modules/mod_run.R b/h2/components/modules/mod_run.R
index 60a2e7c..ade1217 100644
--- a/h2/components/modules/mod_run.R
+++ b/h2/components/modules/mod_run.R
@@ -4,67 +4,40 @@ run_ui <- function(id) {
   ns <- NS(id)
   
   tagList(
-    selectInput(
-      ns("ssp_path"),
-      label = "Select SSP:",
-      choices = list(
-        "SSP 1-1.9" = "input/hector_ssp119.ini",
-        "SSP 1-2.6" = "input/hector_ssp126.ini",
-        "SSP 2-4.5" = "input/hector_ssp245.ini",
-        "SSP 3-7.0" = "input/hector_ssp370.ini",
-        "SSP 4-3.4" = "input/hector_ssp434.ini",
-        "SSP 4-6.0" = "input/hector_ssp460.ini",
-        "SSP 5-3.4OS" = "input/hector_ssp534-over.ini",
-        "SSP 5-8.5" = "input/hector_ssp585.ini"
-      ),
-      selected = "input/hector_ssp119.ini"
-    ),
-    sliderInput(
-      ns("start"),
-      label = "Select start date:",
-      min = 1750,
-      max = 2300,
-      value = 2000,
-      sep = ""
-    ),
-    sliderInput(
-      ns("end"),
-      "Select end date:",
-      min = 1750,
-      max = 2300,
-      value = 2300,
-      sep = ""
-    ),
-    actionButton(ns("run"), "Run Model"),
+    selectInput(ns("ssp_path"), label="Select SSP:",
+                choices = list("SSP 1-1.9"="input/hector_ssp119.ini",
+                               "SSP 1-2.6"="input/hector_ssp126.ini",
+                               "SSP 2-4.5"="input/hector_ssp245.ini",
+                               "SSP 3-7.0"="input/hector_ssp370.ini",
+                               "SSP 4-3.4"="input/hector_ssp434.ini",
+                               "SSP 4-6.0"="input/hector_ssp460.ini",
+                               "SSP 5-3.4OS"="input/hector_ssp534-over.ini",
+                               "SSP 5-8.5"="input/hector_ssp585.ini"),
+                selected = "input/hector_ssp119.ini"),
+    sliderInput(ns("start"), label="Select start date:",
+                min = 1750, max = 2300, value = 2000, sep=""),
+    sliderInput(ns("end"), "Select end date:",
+                min = 1750, max = 2300, value = 2300, sep=""),
+    actionButton(ns("run"),"Run Model"),
     verbatimTextOutput(ns("done"))
   )
 }
 
 run_server <- function(id, r6, i) {
   moduleServer(id, function(input, output, session) {
+    
     observe({
       # store inputs in r6 class
-      r6$ini_file <-
-        reactive({
-          system.file(input$ssp_path, package = "hector")
-        })
-      r6$start <- reactive({
-        input$start
-      })
-      r6$end <- reactive({
-        input$end
-      })
+      r6$ini_file <- reactive({system.file(input$ssp_path,package="hector")})
+      r6$start <- reactive({input$start})
+      r6$end <- reactive({input$end})
       
       # run hector using inputs
       print("Running...") # in command line
       core <- newcore(r6$ini_file())
       run(core)
-      r6$output[[i()]] <-
-        fetchvars(core, r6$start():r6$end()) %>% mutate(run = i())
-      output$done <-
-        renderPrint({
-          as.character(i() - 1)
-        }) #print run number
+      r6$output[[i()]] <- fetchvars(core,r6$start():r6$end()) %>% mutate(run=i())
+      output$done <- renderPrint({as.character(i()-1)}) #print run number
       print("Done") # in command line
       
       i(i() + 1) # add 1 to i. like a pseudo loop for storing output
diff --git a/h2/components/modules/mod_summary.r b/h2/components/modules/mod_summary.r
index eb7c35a..698a823 100644
--- a/h2/components/modules/mod_summary.r
+++ b/h2/components/modules/mod_summary.r
@@ -6,17 +6,15 @@
 summary_ui <- function(id) {
   ns <- NS(id)
   fluidRow(actionButton(ns("print"), "Print"),
-           tableOutput(ns("summary")))
+           dataTableOutput(ns("summary")))
 }
 
 summary_server <- function(id, r6, i) {
   moduleServer(id, function(input, output, session) {
     observe({
-      hectoroutput <-
-        r6$output[[i() - 1]] #i increases at end of mod_run so output is i-1
-      output$summary <- renderTable({
-        hectoroutput
-      })
+      #browser()
+      hectoroutput <- r6$output[[i()-1]]
+      output$summary <- renderDataTable({hectoroutput})
     }) %>%
       bindEvent(input$print) # run when Print button is clicked
     
diff --git a/h2/global.r b/h2/global.r
index 48d0968..85500c4 100644
--- a/h2/global.r
+++ b/h2/global.r
@@ -5,6 +5,7 @@ library(dplyr)
 library(ggplot2)
 library(shinycssloaders)
 library(plotly)
+library(shinyalert)
 
 source("./components/modules/mod_graph.r")
 source("./components/modules/mod_run.r")