JS messaging: getSmiles() and getStereoSmiles() functions do not respond in version Applet-3.3-1209

[neuenschwanm]

When using the example html page on http://jchempaint.github.com/EditorApplet.html or when using the corresponding class files in a custom webpage, it appears that while the applet itself works nicely its funcions getSmiles() and getStereoSmiles() do not invoke any response when called. This problem does not appear with the nigthly build version on http://www.ebi.ac.uk/steinbeck-srv/jchempaint-nightly/

[rwst]

This happens with both sun-jdk and icedtea-web.
Inclusion of cdk-logging.jar gives:

[rwst]

The issue can be worked around by first selecting from menu Tools --> Create SMILES
before accessing the function via Javascript.
Obviously this suggests an initialization problem. Applies to #140 as well.

[rwst]

I'm pretty sure that this is also an icedtea-web (OpenJDK) issue. I have tested 3.3-1209 with both OpenJDK and Sun JDK and this didn't show with Sun JDK. Can you please try with the latest Sun Java plugin for your browser?

[neuenschwanm]

Hi,
with the 3.3-1210 version available now the stereochemistry as well as the GetSmiles() function work fine! Thanks a lot!

Dr. Martin Neuenschwander
Screening Unit/ AG Kries
Institute of Molecular Pharmacology FMP
Campus Berlin-Buch
Robert-Roessle Str. 10
13125 Berlin
Tel +493094062906
Fax +493094062948

rwst [email protected] 08.10.2012 17:43 >>>

I'm pretty sure that this is also an icedtea-web (OpenJDK) issue. I have tested 3.3-1209 with both OpenJDK and Sun JDK and this didn't show with Sun JDK. Can you please try with the latest Sun Java plugin for your browser?
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