README.md

Data Structure

• The data/ folder should have the following structure

  data/raw_data/unlabelled_data
                              ├── ADARP
                              ├── PPG_DaLiA
                              ├── WESAD
                              ├── ue4w
                              ├── SPD
                              ├── WESD
                              ├── in-gauge_en-gage
                              ├── Toadstool
                              ├── stress_detection_nurses_hospital
                              ├── PAAL_ADL
                              ├── WEEE
                              └── big-ideas
  

  data/raw_data/unlabelled_data contains open-access datasets, which are unlabelled with respect to the target task at hand, i.e. acute mood episode vs euthyima classification.

• The command

  python preprocess_ds.py --output_dir data/preprocessed/unsegmented_unlabelled --overwrite --e4selflearning

  will produce the folder data/preprocessed/unsegmented_unlabelled with the following structure:

  data/preprocessed/unsegmented
                    ├── ADARP
                    ├── PPG_DaLiA
                    ├── WESAD
                    ├── ue4w
                    ├── SPD
                    ├── WESD
                    ├── in-gauge_en-gage
                    ├── Toadstool
                    ├── stress_detection_nurses_hospital
                    ├── PAAL_ADL
                    ├── WEEE
                    └── big-ideas
                        ├── 001
                        │   └── channels.h5
                        ...
                        │
                        └── 016
                            └── channels.h5
  

• The command

  python segment.py --output_dir data/preprocessed/sl512_ss128_unlabelled --segmentation_mode 1 --segment_length 512 --step_size 128 --overwrite --data_dir data/preprocessed/unsegmented_unlabelled

  will produce the folder data/preprocessed/sl512_ss128_unlabelled with the following structure:

  data/preprocessed/unsegmented
                    ├── ADARP
                    ├── PPG_DaLiA
                    ├── WESAD
                    ├── ue4w
                    ├── SPD
                    ├── WESD
                    ├── in-gauge_en-gage
                    ├── Toadstool
                    ├── stress_detection_nurses_hospital
                    ├── PAAL_ADL
                    ├── WEEE
                    └── big-ideas
                        ├── 001
                        │   ├── 0.h5
                        │   ├── 1.h5
                        │   ...
                        │   └── 2055.h5
                        ...
                        │
                        └── 016
                            ├── 0.h5
                            ├── 1.h5
                            ...
                            └── 1285.h5