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AssayTerm.md

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igvfclient::AssayTerm

An ontology term from Ontology of Biomedical Investigations (OBI) for assays.

Properties

Name Type Description Notes
release_timestamp character The date the object was released. [optional]
status character The status of the metadata object. [optional] [Enum: [archived, deleted, in progress, preview, released]]
schema_version character The version of the JSON schema that the server uses to validate the object. [optional] [Pattern: ^\d+(\.\d+)*$]
uuid character The unique identifier associated with every object. [optional]
notes character DACC internal notes. [optional] [Pattern: ^(\S+(\s
aliases set[character] Lab specific identifiers to reference an object. [optional]
creation_timestamp character The date the object was created. [optional]
submitted_by character The user who submitted the object. [optional]
submitter_comment character Additional information specified by the submitter to be displayed as a comment on the portal. [optional] [Pattern: ^(\S+(\s
description character A plain text description of the object. [optional] [Pattern: ^(\S+(\s
term_id character An ontology term identifier describing an assay. [optional] [Pattern: ^(OBI
term_name character Ontology term describing a biological sample, assay, trait, or disease. [optional] [Pattern: ^(?![\s"'])[\S
deprecated_ntr_terms set[character] A list of deprecated NTR terms previously associated with this ontology term. [optional]
is_a set[character] A list of ontology terms which are the nearest ancestor to this ontology term. [optional]
preferred_assay_titles set[character] The custom lab preferred labels that this assay term may be associated with. [optional] [Enum: ]
@id character [optional]
@type array[character] [optional]
summary character A summary of the ontology term. [optional]
name character A unique identifier for the ontology term, reformatted from the original term ID. [optional]
synonyms set[character] Synonyms for the term that have been recorded in an ontology. [optional]
ancestors set[character] List of term names of ontological terms that precede the given term in the ontological tree. These ancestor terms are typically more general ontological terms under which the term is classified. [optional]
ontology character The ontology in which the term is recorded. [optional]
assay_slims set[character] A broad categorization of the assay term. [optional]
category_slims set[character] The type of feature or interaction measured by the assay. [optional]
objective_slims set[character] The purpose of the assay. [optional]