From 2dd8b44969ff7e71521de604a1c58a02c39946a9 Mon Sep 17 00:00:00 2001 From: zhenxian Date: Sat, 20 Aug 2022 11:17:00 +0800 Subject: [PATCH] Update README.md --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index 31e8bd2..0aac49d 100644 --- a/README.md +++ b/README.md @@ -55,7 +55,7 @@ A short preprint describing Clair3's algorithms and results is at [bioRxiv](http ## Latest Updates -*v0.1-r12 (Aug 19)* : 1. CRAM input is supported ([#117](https://github.com/HKU-BAL/Clair3/issues/117)). 2. Bumped up dependencies' version to "Python 3.9" ([#96](https://github.com/HKU-BAL/Clair3/issues/96)), "TensorFlow 2.8", "Samtools 1.15.1", "WhatsHap 1.4". 3. VCF DP tag now shows raw coverage for both pileup and full-alignment calls (before r12, sub-sampled coverage was shown for pileup calls if average DP > 144, [#128](https://github.com/HKU-BAL/Clair3/issues/128)). 4. Fixed Illumina representation unification out-of-range error in training ([#110](https://github.com/HKU-BAL/Clair3/issues/110)). +*v0.1-r12 (Aug 19)* : 1. CRAM input is supported ([#117](https://github.com/HKU-BAL/Clair3/issues/117)). 2. Bumped up dependencies' version to "Python 3.9" ([#96](https://github.com/HKU-BAL/Clair3/issues/96)), "TensorFlow 2.8", "Samtools 1.15.1", "WhatsHap 1.4". 3. VCF DP tag now shows raw coverage for both pileup and full-alignment calls (before r12, sub-sampled coverage was shown for pileup calls if average DP > 144, ([#128](https://github.com/HKU-BAL/Clair3/issues/128)). 4. Fixed Illumina representation unification out-of-range error in training ([#110](https://github.com/HKU-BAL/Clair3/issues/110)). *v0.1-r11 minor 2 (Apr 16)* : 1. fixed a bug in GVCF output that occasionally caused missing of non-variant positions at chunk boundaries. 2. fixed a bug in GVCF output that consumes too much memory for caching, now GVCF output mode takes amount of memory similar to VCF ([#88](https://github.com/HKU-BAL/Clair3/issues/88)). **The minor patches are in the source code and included in all the latest installation options versioned r11.**