MatrixGeneExpression.R force parameter not properly in if

[eliascrapa]

In MatrixGeneExpression.R there is an error of applying the force

It does not run when force is TRUE but runs if FORCE is false

seqRNA <- paste0(unique(seqnames(seRNA)))
if(sum(seqRNA %in% paste0(seqnames(chromSizes))) <= 0.5 * length(seqRNA)){
if(force){
stop(paste0("Detected less than 50% of seqnames for seRNA in chromSizes! Are you sure the seqnames of your seRNA are correct?!"))
}else{
message(paste0("Detected less than 50% of seqnames for seRNA in chromSizes! Continuing since force = TRUE!"))
}

[rcorces]

Hi @eliascrapa! Thanks for using ArchR! Lately, it has been very challenging for me to keep up with maintenance of this package and all of my other
responsibilities as a PI. I have not been responding to issue posts and I have not been pushing updates to the software. We are actively searching to hire
a computational biologist to continue to develop and maintain ArchR and related tools. If you know someone who might be a good fit, please let us know!
In the meantime, your issue will likely go without a reply. Most issues with ArchR right not relate to compatibility. Try reverting to R 4.1 and Bioconductor 3.15.
Newer versions of Seurat and Matrix also are causing issues. Sorry for not being able to provide active support for this package at this time.

[immanuelazn]

Thanks for the heads up @eliascrapa, I'll try reproducing on my end but probably won't be until eow.