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Running chromVAR for a subset of peaks?

rargelaguet asked Mar 12, 2021 in Questions / Documentation · Unanswered

1
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Peak2Gene Link Calculation

rojinsafavi asked Mar 12, 2021 in Questions / Documentation · Answered

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Questions about gene scores

Ping-lin14 asked Mar 10, 2021 in Questions / Documentation · Unanswered

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peak to gene

rojinsafavi asked Mar 8, 2021 in Questions / Documentation · Unanswered

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Using Peak-Gene Assignments to Calculate Gene Score

emmawwinchester asked Feb 23, 2021 in Questions / Documentation · Answered

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Running addDeviations but constrained within groups, rather than using a background across all groups.

markphillippebworth asked Feb 10, 2021 in Questions / Documentation · Unanswered

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Calling peaks in scATAC-seq with Tile Matrix (not using MACS2)

RegnerM2015 asked Jan 5, 2021 in Questions / Documentation · Unanswered

1