Obtaining enriched motif result for each peak #2189
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yuyuliu
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I'm analyzing scATAC-seq data by following their official manual.
In the section "12.1 Motif Enrichment in Differential Peaks", I obtained good results comparing the motif enrichment of differential peaks between two samples for a same cluster of cells.
Now, I want to know which peaks were assigned for enrichment of the significant TFs in my results. Is it possible to do that?
I looked into the results returned by peakAnnoEnrichment, but it only contained TFs, p-values and the number of background peaks, etc.
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