From 629cf1dedbb378f84389b7618a2a22a5a6ca2214 Mon Sep 17 00:00:00 2001 From: Ryan Corces Date: Mon, 3 Apr 2023 16:05:40 -0700 Subject: [PATCH] make colData entries for Group and PBGroup PBGroup is a longer form name that differentiates different PB subgroups. Group tells which value in `groupBy` this column corresponds to --- R/GroupExport.R | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/R/GroupExport.R b/R/GroupExport.R index ac68fb94..af5c1233 100644 --- a/R/GroupExport.R +++ b/R/GroupExport.R @@ -223,7 +223,8 @@ getPBGroupSE <- function( logFile = logFile ) sePB <- sePB[,colnames(sePB) != "NA"] - colData(sePB)$Group <- stringr::str_split(colnames(sePB), pattern="\\.Rep", simplify=TRUE)[,1] + colData(sePB)$PBGroup <- stringr::str_split(colnames(sePB), pattern="\\.Rep", simplify=TRUE)[,1] + colData(sePB)$Group <- sapply(stringr::str_split(colnames(sePB), pattern="\\."), `[`, 1) sePB