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RDF Metadata handling #40

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korseby opened this issue Dec 12, 2024 · 0 comments
Open

RDF Metadata handling #40

korseby opened this issue Dec 12, 2024 · 0 comments

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@korseby
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korseby commented Dec 12, 2024

Accomplished at the de.NBI biohackathon,

  • 2L1_F1_b.jpg.yaml: example metadata file

  • yaml2omero.py reads metadata (belonging to the above demo image) and adds this metadata to an OMERO server

  • yaml2rdf.py reads metadata (belonging to the above demo image) and creates an RDF from it, this still needs to be validated against the RDF generated using omero rdf

  • key_remap.py generates an examplary query against an OMERO server and extracts all projects that have metadata fields Latitude and Longitude and replaces them with more standardized EVENT_LATITUDE_Start, EVENT_LATITUDE_End, EVENT_LONGITUDE_Start, EVENT_LONGITUDE_End

2L1_F1_b.jpg.yaml.txt
yaml2omero.py.txt
yaml2rdf.py.txt
key_remap.py.txt

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