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Next Journal Club meeting will be 25th of April, at 2pm in the Forhus 7 at the GeoGenetic meeting room.
This journal club is an open offer to anyone who would like to read and discuss literature within the field of ancient environmental DNA/genomics. It will include papers with various scopes, but that all confines within the Ancient eDNA field.
The location is the meeting room in Forhus 7, Øster Voldgade 7, 1350 Kbh C.
We will read and discuss this recent paper Mitochondrial genomes of Pleistocene megafauna retrieved from recent sediment layers of two Siberian lakes by Seeber et al. preprint (2nd version). COOL thing you can read the reviewer comments here.
If you are interested in reading more the Sedimentary Ancient DNA Society compiles a list of literature that includes sedimentary DNA both modern and ancient.
You can also consider joining the society or signing up for their newsletter which includes more news within the field.
Lastly, if you have any questions send us an email: Rikai: [email protected] Guilia: [email protected] Mikkel: [email protected]
Recently published papers:
New papers Jan Laine et al., (2024) published "Late Pleistocene stickleback environmental genomes reveal the chronology of freshwater adaptation " in Current Biology.
Claudia Piccini et al., (2024) published "Prokaryotic richness and diversity increased during Holocene glacier retreat and onset of an Antarctic Lake " in communications earth & environment.
Nicole R. Foster et al., (2024) published "Environmental DNA identifies coastalplant community shift 1,000 years agoin Torrens Island, South Australia " in communications earth & environment.
Dongna Yan et al., (2024) published "Organic matter content and source is associated with the depth-dependent distribution of prokaryotes in lake sediments" in Freshwater Biology.
Dongna Yan et al., (2024) published "Anthropogenic drivers accelerate the changes of lake microbial eukaryotic communities over the past 160 years" in Quaternary Science Reviews.
Prashasti Singh et al., (2024) published "Marine sedimentary ancient DNA from Antarctic diatoms " in Palaeogeography, Palaeoclimatology, Palaeoecology.
Georgia Thomson-Laing et al., (2024) published "Sedimentary ancient DNA reveals the impact of anthropogenic land use disturbance and ecological shifts on fish community structure in small lowland lake " in Science of The Total Environment.
Armando Espinosa Prieto et al., (2024) published "Finding the perfect pairs: A matchmaking of plant markers and primers for multi-marker eDNA metabarcoding " in Molecular Ecology Resources.
Leighton King et al., (2024) published "Anthropogenic forcing leads to an abrupt shift to phytoplankton dominance in a shallow eutrophic lake " in Freshwater Biology.
Preprints
Alexandra Schmidt(2023) made the preprint "Decoding the Baltic Sea's Past and Present: A simple Molecular Index for Ecosystem Assessment" available at bioRxiv
Aleksandra Laura Pach(2023) made the preprint "Digesting the data: Proper validation in ancient metagenomic studies is essential" available at bioRxiv