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linkbcs.tmpl
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linkbcs.tmpl
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#!/bin/csh -f
setenv BCSDIR @BCSDIR
@DATAOCEANsetenv SSTDIR @SSTDIR
@COUPLEDsetenv CPLDIR @COUPLEDIR/@OCNMODEL
setenv CHMDIR @CHMDIR
setenv BCRSLV @ATMOStag_@OCEANtag
@MOM5setenv SSTDIR @COUPLEDIR/SST/MERRA2/@OGCM_IMx@OGCM_JM/v1
@MOM6setenv SSTDIR @COUPLEDIR/SST/MERRA2/@OGCM_IMx@OGCM_JM/v1
@COUPLED /bin/mkdir -p RESTART
/bin/mkdir -p ExtData
/bin/ln -sf $CHMDIR/* ExtData
@COUPLED/bin/ln -sf $CPLDIR/@OGCM_IMx@OGCM_JM/SEAWIFS_KPAR_mon_clim.@OGCM_IMx@OGCM_JM SEAWIFS_KPAR_mon_clim.data
@COUPLED/bin/ln -sf $BCSDIR/geometry/${BCRSLV}/${BCRSLV}-Pfafstetter.til tile.data
@COUPLED/bin/ln -sf $BCSDIR/geometry/${BCRSLV}/${BCRSLV}-Pfafstetter.TRN runoff.bin
@MOM5/bin/ln -sf $CPLDIR/@OGCM_IMx@OGCM_JM/MAPL_Tripolar.nc .
@MOM6/bin/ln -sf $CPLDIR/@OGCM_IMx@OGCM_JM/MAPL_Tripolar.nc .
@MIT/bin/ln -sf $BCSDIR/geometry/${BCRSLV}/mit.ascii
@MOM5/bin/ln -sf $CPLDIR/@OGCM_IMx@OGCM_JM/vgrid@OGCM_LM.ascii ./vgrid.ascii
@MOM6/bin/ln -sf $CPLDIR/@OGCM_IMx@OGCM_JM/vgrid@OGCM_LM.ascii ./vgrid.ascii
@MIT/bin/ln -sf $CPLDIR/DC0360xPC0181_LL5400x15-LL.bin DC0360xPC0181_LL5400x15-LL.bin
# Precip correction
#/bin/ln -s /discover/nobackup/projects/gmao/share/gmao_ops/fvInput/merra_land/precip_CPCUexcludeAfrica-CMAP_corrected_MERRA/GEOSdas-2_1_4 ExtData/PCP
@DATAOCEAN/bin/ln -sf $BCSDIR/geometry/$BCRSLV/${BCRSLV}-Pfafstetter.til tile.data
@DATAOCEANif( -e $BCSDIR/geometry/$BCRSLV/${BCRSLV}-Pfafstetter.TIL) then
@DATAOCEAN/bin/ln -sf $BCSDIR/geometry/$BCRSLV/${BCRSLV}-Pfafstetter.TIL tile.bin
@DATAOCEANendif
# DAS or REPLAY Mode (AGCM.rc: pchem_clim_years = 1-Year Climatology)
# --------------------------------------------------------------------
@OPS_SPECIES/bin/ln -sf $BCSDIR/PCHEM/pchem.species.Clim_Prod_Loss.z_721x72.nc4 species.data
# CMIP-5 Ozone Data (AGCM.rc: pchem_clim_years = 228-Years)
# ----------------------------------------------------------
@CMIP_SPECIES/bin/ln -sf $BCSDIR/PCHEM/pchem.species.CMIP-5.1870-2097.z_91x72.nc4 species.data
# S2S pre-industrial with prod/loss of stratospheric water vapor
# (AGCM.rc: pchem_clim_years = 3-Years, and H2O_ProdLoss: 1 )
# --------------------------------------------------------------
#/bin/ln -sf $BCSDIR/Shared/pchem.species.CMIP-6.wH2OandPL.1850s.z_91x72.nc4 species.data
# MERRA-2 Ozone Data (AGCM.rc: pchem_clim_years = 39-Years)
# ----------------------------------------------------------
@MERRA2OX_SPECIES/bin/ln -sf $BCSDIR/PCHEM/pchem.species.CMIP-5.MERRA2OX.197902-201706.z_91x72.nc4 species.data
/bin/ln -sf $BCSDIR/land/$BCRSLV/visdf_@AGCM_IMx@AGCM_JM.dat visdf.dat
/bin/ln -sf $BCSDIR/land/$BCRSLV/nirdf_@AGCM_IMx@AGCM_JM.dat nirdf.dat
/bin/ln -sf $BCSDIR/land/$BCRSLV/vegdyn_@AGCM_IMx@AGCM_JM.dat vegdyn.data
/bin/ln -sf $BCSDIR/land/$BCRSLV/lai_clim_@AGCM_IMx@AGCM_JM.data lai.data
/bin/ln -sf $BCSDIR/land/$BCRSLV/green_clim_@AGCM_IMx@AGCM_JM.data green.data
/bin/ln -sf $BCSDIR/land/$BCRSLV/ndvi_clim_@AGCM_IMx@AGCM_JM.data ndvi.data
>>>GCMRUN_CATCHCN<<<if ( -f $BCSDIR/$BCRSLV/lnfm_clim_@AGCM_IMx@AGCM_JM.data ) /bin/ln -sf $BCSDIR/$BCRSLV/lnfm_clim_@AGCM_IMx@AGCM_JM.data lnfm.data
>>>GCMRUN_CATCHCN<<</bin/ln -s $BCSDIR/land/shared/CO2_MonthlyMean_DiurnalCycle.nc4
set MERRA2OX_SPECIES = "#"
/bin/ln -sf $BCSDIR/TOPO/TOPO_@ATMOStag/smoothed/topo_DYN_ave_@AGCM_IMx@AGCM_JM.data topo_dynave.data
/bin/ln -sf $BCSDIR/TOPO/TOPO_@ATMOStag/smoothed/topo_GWD_var_@AGCM_IMx@AGCM_JM.data topo_gwdvar.data
/bin/ln -sf $BCSDIR/TOPO/TOPO_@ATMOStag/smoothed/topo_TRB_var_@AGCM_IMx@AGCM_JM.data topo_trbvar.data
@COUPLEDcp $HOMDIR/*_table .
@COUPLEDcp $CPLDIR/@OGCM_IMx@OGCM_JM/INPUT/* INPUT
@CICE4/bin/ln -sf $CPLDIR/@OGCM_IMx@OGCM_JM/cice/kmt_cice.bin .
@CICE4/bin/ln -sf $CPLDIR/@OGCM_IMx@OGCM_JM/cice/grid_cice.bin .
@CICE6/bin/ln -sf $CPLDIR/@OGCM_IMx@OGCM_JM/cice6/cice6_grid.nc .
@CICE6/bin/ln -sf $CPLDIR/@OGCM_IMx@OGCM_JM/cice6/cice6_kmt.nc .
@CICE6/bin/ln -sf $CPLDIR/@OGCM_IMx@OGCM_JM/cice6/cice6_global.bathy.nc .
@DATAOCEAN/bin/ln -sf $SSTDIR/@SSTFILE sst.data
@DATAOCEAN/bin/ln -sf $SSTDIR/@ICEFILE fraci.data
@DATAOCEAN/bin/ln -sf $SSTDIR/@KPARFILE SEAWIFS_KPAR_mon_clim.data