Updating Dockerfiles

tmbgreaves · tmbgreaves · commit b01f26e0ff21 · 2019-09-26T19:54:23.000+01:00
This commit adds environment for HDF5-openmpi location
at configure-time.
diff --git a/docker/Dockerfile.bionic b/docker/Dockerfile.bionic
@@ -30,6 +30,8 @@ RUN apt-get -y install fluidity-dev
 
 ENV PETSC_DIR /usr/lib/petscdir/3.8.3
 ENV LD_LIBRARY_PATH /usr/lib/petscdir/3.8.3/linux-gnu-c-opt/lib
+ENV LDFLAGS -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi
+ENV CPPFLAGS -I/usr/include/hdf5/openmpi
 
 # Add a Fluidity user who will be the default user for this container
 # Make sure the user has a userid matching the host system
diff --git a/docker/Dockerfile.xenial b/docker/Dockerfile.xenial
@@ -22,6 +22,8 @@ RUN apt-get -y install fluidity-dev
 
 ENV PETSC_DIR /usr/lib/petscdir/3.6.3
 ENV LD_LIBRARY_PATH /usr/lib/petscdir/3.6.3/linux-gnu-c-opt/lib
+ENV LDFLAGS -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi
+ENV CPPFLAGS -I/usr/include/hdf5/openmpi
 
 # Add a Fluidity user who will be the default user for this container
 # Make sure the user has a userid matching the host system
