diff --git a/CHANGELOG.md b/CHANGELOG.md index 527e4a6..4d7b241 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -3,7 +3,11 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/) and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html). -## v2.1.0dev - [date] + +## v2.2.0-dev - [date] + + +## v2.1.0dev ### `Added` - [#35](https://github.com/Ferlab-Ste-Justine/Post-processing-Pipeline/pull/35) Added allow_old_gatk_data parameter (set to false by default). diff --git a/README.md b/README.md index b784aaf..ed0007c 100644 --- a/README.md +++ b/README.md @@ -38,7 +38,7 @@ This schema was done using [inkscape](https://inkscape.org/) with the good prati Here is an example nextflow command to run the pipeline: ```bash -nextflow run -c cluster.config Ferlab-Ste-Justine/Post-processing-Pipeline -r "v2.1.0" \ +nextflow run -c cluster.config Ferlab-Ste-Justine/Post-processing-Pipeline -r "v2.2.0" \ -params-file params.json \ --input samplesheet.csv \ --outdir results/dir \ diff --git a/docs/usage.md b/docs/usage.md index f382c39..c2c6d3f 100644 --- a/docs/usage.md +++ b/docs/usage.md @@ -54,7 +54,7 @@ These files must be correctly downloaded and specified through pipeline paramete The typical command for running the pipeline is as follows: ```bash -nextflow run -c cluster.config Ferlab-Ste-Justine/Post-processing-Pipeline -r "v2.1.0" \ +nextflow run -c cluster.config Ferlab-Ste-Justine/Post-processing-Pipeline -r "v2.2.0" \ -params-file params.json \ --input samplesheet.csv \ --outdir results/dir \ diff --git a/nextflow.config b/nextflow.config index 6ad1bd8..1a97e4f 100644 --- a/nextflow.config +++ b/nextflow.config @@ -371,7 +371,7 @@ manifest { description = """Variant analysis for genome and exome GVCFs""" mainScript = 'main.nf' nextflowVersion = '!>=23.10.1' - version = '2.1.0dev' + version = '2.2.0-dev' doi = '' }