Minor updates and bump to 2.0.8

FNNDSC · Feb 5, 2021 · 5469692 · 5469692
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diff --git a/README.rst b/README.rst
@@ -46,7 +46,7 @@ Synopsis
             [--version]                                                 \
             [-y] [--synopsis]                                           \
             <inputDir>                                                  \
-            <outputDir>  
+            <outputDir>
 
 Description
 -----------
@@ -55,7 +55,7 @@ Description
 
 For more detailed description, consult the documentation here https://github.com/FNNDSC/mgz2imgslices
 
-**NOTE:** 
+**NOTE:**
 
 In the instances where the input ``mgz`` volume voxel values are interpreted to imply *labels* (i.e. segmented cortical regions), this plugin can use the embedded  FreeSurfer ``FreeSurferColorLUT.txt`` file to map FreeSurfer *label* IDs to human readable cortical label strings in the naming of output directories.
 
@@ -107,13 +107,13 @@ Arguments
     the <LUTfile> to ``__val__``.
 
     While running the docker image, you can also pass ``__fs__`` which will use
-    the FreeSurferColorLUT.txt from within the docker container to perform a 
-    looktup on the filtered voxel label values according to the contents of 
+    the FreeSurferColorLUT.txt from within the docker container to perform a
+    looktup on the filtered voxel label values according to the contents of
     the FreeSurferColorLUT.txt
 
     [--skipAllLabels]
     Skips all labels and converts only the whole mgz volume to png/jpg images.
-    
+
     [-s|--skipLabelValueList <ListOfLabelNumbersToSkip>]
     If specified as a comma separated string of label numbers,
     will not create directories of those label numbers.
@@ -179,7 +179,7 @@ First, let's create a directory, say ``devel`` wherever you feel like it. We wil
     cd devel
     export DEVEL=$(pwd)
 
-Now, we need to fetch sample MGZ data. 
+Now, we need to fetch sample MGZ data.
 
 Pull MGZ data
 ~~~~~~~~~~~~~
@@ -232,7 +232,7 @@ Copy and modify the different commands below as needed:
         --skipLabelValueList 0,2                                \
         --normalize                                             \
         --saveImages                                            \
-        --wholeVolume entireVolume                              \    
+        --wholeVolume entireVolume                              \
         --verbosity 1                                           \
         /incoming /outgoing
 

diff --git a/mgz2imageslices/mgz2imageslices.py b/mgz2imageslices/mgz2imageslices.py
@@ -58,7 +58,7 @@ class Mgz2imgslices(ChrisApp):
     TYPE                    = 'ds'
     DESCRIPTION             = 'An app to convert mgz volumes to numpy arrays and png image formats'
     DOCUMENTATION           = 'https://github.com/FNNDSC/pl-mgz2imgslices'
-    VERSION                 = '2.0.6'
+    VERSION                 = '2.0.8'
     ICON                    = '' # url of an icon image
     LICENSE                 = 'Opensource (MIT)'
     MAX_NUMBER_OF_WORKERS   = 1  # Override with integer value

diff --git a/setup.py b/setup.py
@@ -21,7 +21,7 @@ def readme():
       name             =   'mgz2imgslices',
       # for best practices make this version the same as the VERSION class variable
       # defined in your ChrisApp-derived Python class
-      version          =   '2.0.6',
+      version          =   '2.0.8',
       description      =   'An app to ...',
       long_description =   readme(),
       author           =   'FNNDSC',