From 8e2b178d6c1d498d43bbe1635636a043cd9596ff Mon Sep 17 00:00:00 2001 From: Sandip Samal <32147904+Sandip117@users.noreply.github.com> Date: Tue, 24 Oct 2023 15:20:51 -0400 Subject: [PATCH] Update README.md --- README.md | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/README.md b/README.md index b68c173..884d443 100644 --- a/README.md +++ b/README.md @@ -40,14 +40,14 @@ apptainer exec docker://fnndsc/pl-image_textRemove image_textRemove --help ## Examples -`app` requires two positional arguments: a directory containing +`image_textRemove` requires two positional arguments: a directory containing input data, and a directory where to create output data. First, create the input directory and move input data into it. ```shell mkdir incoming/ outgoing/ mv some.dat other.dat incoming/ -apptainer exec docker://fnndsc/pl-image_textRemove:latest app [--args] incoming/ outgoing/ +apptainer exec docker://fnndsc/pl-image_textRemove:latest image_textRemove [--args] incoming/ outgoing/ ``` ## Development @@ -64,7 +64,7 @@ docker build -t localhost/fnndsc/pl-image_textRemove . ### Running -Mount the source code `app.py` into a container to try out changes without rebuild. +Mount the source code `image_textRemove.py` into a container to try out changes without rebuild. ```shell docker run --rm -it --userns=host -u $(id -u):$(id -g) \