From c96392412402debe9c8877cb710ffe8de1e02a75 Mon Sep 17 00:00:00 2001
From: Ryan J Field <RyanJField@users.noreply.github.com>
Date: Fri, 8 Nov 2024 10:03:07 +0000
Subject: [PATCH 1/4] Update Actions

---
 .github/workflows/test-build.yaml | 7 +++----
 1 file changed, 3 insertions(+), 4 deletions(-)

diff --git a/.github/workflows/test-build.yaml b/.github/workflows/test-build.yaml
index 19f14876..86e16f5f 100644
--- a/.github/workflows/test-build.yaml
+++ b/.github/workflows/test-build.yaml
@@ -1,9 +1,8 @@
-on:
+on: 
   push:
-    branches:
-      - '*'
   workflow_dispatch:
-
+  schedule:
+    - cron: "0 9 * * 1" # Run Every Monday at 9AM
 jobs:
   R-CMD-check:
     # If the commit message isn't [skip ci]

From cd9e5586e6897ca8f5b1e5c9658280e3ccbb9184 Mon Sep 17 00:00:00 2001
From: Ryan Field <RyanJField@users.noreply.github.com>
Date: Mon, 2 Dec 2024 17:16:07 +0000
Subject: [PATCH 2/4] Update Coverage

---
 .github/workflows/test-coverage.yaml | 27 +++++++++++++++++++++++----
 1 file changed, 23 insertions(+), 4 deletions(-)

diff --git a/.github/workflows/test-coverage.yaml b/.github/workflows/test-coverage.yaml
index ebb0a3ef..5a30691f 100644
--- a/.github/workflows/test-coverage.yaml
+++ b/.github/workflows/test-coverage.yaml
@@ -27,10 +27,29 @@ jobs:
             pkgdown
             remotes
 
-      - name: Install local registry
-        run: /bin/bash -c "$(curl -fsSL https://data.scrc.uk/static/localregistry.sh)"
-      - name: Start registry
-        run: $HOME/.fair/registry/scripts/start_fair_registry
+       - name: Checkout FAIRDataPipeline/FAIR-CLI
+        uses: actions/checkout@v4
+        with:
+          repository: FAIRDataPipeline/FAIR-CLI
+          path: FAIR-CLI
+      - name: Move FAIR-CLI
+        run: mv FAIR-CLI ../FAIR-CLI
+      - name: Install Poetry
+        uses: snok/install-poetry@v1
+        with:
+          virtualenvs-create: true
+          virtualenvs-in-project: true
+
+      - name: Install and initialise FAIR CLI
+        run: |
+          cd ../FAIR-CLI
+          poetry install
+          source $VENV
+          cd '${{ github.workspace }}'
+          fair registry install --version main
+          fair init --ci
+          fair registry start
+        shell: bash
 
       - name: Query dependencies
         run: |

From abdc8d9fcd58ca3917e4dfd9c340c4f6589e22c9 Mon Sep 17 00:00:00 2001
From: Ryan Field <RyanJField@users.noreply.github.com>
Date: Mon, 2 Dec 2024 17:17:01 +0000
Subject: [PATCH 3/4] Fix workflow

---
 .github/workflows/test-coverage.yaml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/test-coverage.yaml b/.github/workflows/test-coverage.yaml
index 5a30691f..3ea238c7 100644
--- a/.github/workflows/test-coverage.yaml
+++ b/.github/workflows/test-coverage.yaml
@@ -27,7 +27,7 @@ jobs:
             pkgdown
             remotes
 
-       - name: Checkout FAIRDataPipeline/FAIR-CLI
+      - name: Checkout FAIRDataPipeline/FAIR-CLI
         uses: actions/checkout@v4
         with:
           repository: FAIRDataPipeline/FAIR-CLI

From 9f9a3a0d2dfcfdc88ad22c824b86281aae4b4832 Mon Sep 17 00:00:00 2001
From: Ryan Field <RyanJField@users.noreply.github.com>
Date: Mon, 2 Dec 2024 17:28:11 +0000
Subject: [PATCH 4/4] init only once

---
 .github/workflows/test-coverage.yaml | 1 -
 1 file changed, 1 deletion(-)

diff --git a/.github/workflows/test-coverage.yaml b/.github/workflows/test-coverage.yaml
index 3ea238c7..7cd70e93 100644
--- a/.github/workflows/test-coverage.yaml
+++ b/.github/workflows/test-coverage.yaml
@@ -47,7 +47,6 @@ jobs:
           source $VENV
           cd '${{ github.workspace }}'
           fair registry install --version main
-          fair init --ci
           fair registry start
         shell: bash