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updated test input parameters
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test_input.json

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@@ -241,18 +241,18 @@
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"taxon_regulation_plot" : false,
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"network_size_plot" : false,
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"site_printout" : false,
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"entrez_email" : "[email protected]",
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"entrez_apikey" : "f87b172711faa816dce1073945384c090107",
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"entrez_email" : "[email protected]",
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"entrez_apikey" : "YOUR_API_KEY",
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"sleep" : 1.5,
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"TF_eval" : 0.00000000001,
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"homolog_eval" : 0.1,
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"hmmer_eval" : 0.0000001,
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"COG_search" : true,
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"NOG_search" : false,
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"PFAM_search" : false,
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"COG_dbname" : "/home/ivan/HMMERdbs/COG_database.hmm",
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"eggNOG_dbname" : "/home/ivan/HMMERdbs/bact.hmmer",
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"PFAM_dbname" : "/home/ivan/HMMERdbs/Pfam-A.hmm",
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"COG_dbname" : "/home/YOURPATH/HMMERdbs/COG_database.hmm",
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"eggNOG_dbname" : "/home/YOURPATH/HMMERdbs/bact.hmmer",
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"PFAM_dbname" : "/home/YOURPATH/HMMERdbs/Pfam-A.hmm",
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"OGejump" : 5,
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"maxCOG" : 2,
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"maxNOG" : 2,

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