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Installation Issues with EMLassemblyline Due to taxize Removal from CRAN #139

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clnsmth opened this issue Oct 16, 2024 · 0 comments
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@clnsmth
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clnsmth commented Oct 16, 2024

We're encountering difficulties installing the EMLassemblyline package due to the recent removal of the taxize package from CRAN. This dependency is crucial for taxonomyCleanr's functionality, which is a dependency of EMLassemblyline.

While a permanent solution is being developed by the taxize maintainers (here), you can temporarily address this issue by installing taxize and taxonomyCleanr, and then EMLassemblyline from GitHub:

install.packages("remotes")
library(remotes)

install_github("ropensci/taxize")
install_github("EDIorg/taxonomyCleanr")
install_github("EDIorg/EMLassemblyline")

By following these steps, you should be able to successfully install and use EMLassemblyline until the CRAN issue is resolved.

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