window id product subdirectory

Author: horta

c-core/CMakeLists.txt

@@ -1,5 +1,5 @@
 cmake_minimum_required(VERSION 3.20.2 FATAL_ERROR)
-project(deciphon VERSION 0.18.2 LANGUAGES C)
+project(deciphon VERSION 0.19.0 LANGUAGES C)
 
 include(cmake/warnings.cmake)
 include(cmake/sanitizers.cmake)

c-core/product_thread.c

@@ -69,11 +69,14 @@ int product_thread_put_hmmer(struct product_thread *x,
   int rc = 0;
   char const *dir = x->dirname;
   long seq = x->line.sequence;
+  int win = x->line.window;
   char *prot = x->line.protein;
 
-  if ((rc = format(file, FS_PATH_MAX, "%s/hmmer/%ld", dir, seq))) return rc;
+  if ((rc = format(file, FS_PATH_MAX, "%s/hmmer/%ld/%d", dir, seq, win)))
+    return rc;
   if ((rc = fs_mkdir(file, true))) return rc;
-  if ((rc = format(file, FS_PATH_MAX, "%s/hmmer/%ld/%s.h3r", dir, seq, prot)))
+  if ((rc = format(file, FS_PATH_MAX, "%s/hmmer/%ld/%d/%s.h3r", dir, seq, win,
+                   prot)))
     return rc;
 
   FILE *fp = fopen(file, "wb");

c-core/test_scan.c

@@ -15,8 +15,8 @@ static struct params params_list[] = {
     {1, false, false}, {1, false, false}, {1, false, true}, {1, false, true},
     {1, true, false},  {1, true, false},  {1, true, true},  {1, true, true}};
 static bool dial_list[] = {true, false, true, false, true, false, true, false};
-static long chksum_list[] = {34728, 34728, 55553, 55553,
-                             46028, 46028, 46028, 46028};
+static long chksum_list[] = {61836, 34728, 61836, 55553,
+                             61836, 46028, 61836, 46028};
 
 static void test_invalid_sequence();
 static void test_normal_scan(void);