From 5ef8cde04598b3c8928cd5594875f2400995c057 Mon Sep 17 00:00:00 2001
From: Danilo Horta <danilo.horta@pm.me>
Date: Fri, 6 Dec 2024 16:58:04 +0000
Subject: [PATCH] =?UTF-8?q?Update=20dependencies=20and=20fix=20test=20proc?=
 =?UTF-8?q?ess=20handling=20=F0=9F=9B=A0?=
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- Bumped version in python-core/pyproject.toml to "1.0.11"
- Upgraded h3daemon dependency in both TOML files
- Updated deciphon-core dependency in worker TOML file
- Improved test process handling in test_hmmer.py

These updates ensure compatibility with the latest features and fix
potential issues in tests by properly managing asynchronous operations.
---
 python-core/pyproject.toml | 4 ++--
 worker/pyproject.toml      | 4 ++--
 worker/tests/test_hmmer.py | 3 ++-
 3 files changed, 6 insertions(+), 5 deletions(-)

diff --git a/python-core/pyproject.toml b/python-core/pyproject.toml
index edde4e1..f70baa8 100644
--- a/python-core/pyproject.toml
+++ b/python-core/pyproject.toml
@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "deciphon-core"
-version = "1.0.9"
+version = "1.0.11"
 description = "Python wrapper around the Deciphon C library"
 authors = ["Danilo Horta <horta@ebi.ac.uk>"]
 license = "MIT"
@@ -24,7 +24,7 @@ generate-setup-file = false
 
 [tool.poetry.group.dev.dependencies]
 pytest = "^8.2"
-h3daemon = "^0.16.9"
+h3daemon = "^0.16.14"
 gitpython = "^3.1.43"
 
 [tool.pytest.ini_options]
diff --git a/worker/pyproject.toml b/worker/pyproject.toml
index e5bf72b..8cfb500 100644
--- a/worker/pyproject.toml
+++ b/worker/pyproject.toml
@@ -8,8 +8,8 @@ readme = "README.md"
 
 [tool.poetry.dependencies]
 python = "^3.9"
-h3daemon = "^0.16.11"
-deciphon-core = "^1.0.8"
+h3daemon = "^0.16.14"
+deciphon-core = "^1.0.10"
 loguru = "^0.7.2"
 tenacity = "^9.0.0"
 deciphon-snap = "^1.0.3"
diff --git a/worker/tests/test_hmmer.py b/worker/tests/test_hmmer.py
index 718a3ba..26647ff 100644
--- a/worker/tests/test_hmmer.py
+++ b/worker/tests/test_hmmer.py
@@ -11,6 +11,7 @@ def test_hmmer(tmp_path, files_path: Path):
     os.chdir(tmp_path)
     shutil.copy(files_path / "minifam.hmm", Path("minifam.hmm"))
     hmmfile = HMMFile(path=Path("minifam.hmm"))
-    hmmer = launch_hmmer(hmmfile).result()
+    future = launch_hmmer(hmmfile)
+    hmmer = future.result()
     with hmmer:
         hmmer.port