From 4d6b64995f1dd32d4d339ee42b3c2403c53c6626 Mon Sep 17 00:00:00 2001 From: "github-actions[bot]" <41898282+github-actions[bot]@users.noreply.github.com> Date: Mon, 23 Dec 2024 13:53:53 +0100 Subject: [PATCH] Update Julia manifest (#1985) Update Julia dependencies to the latest version. Co-authored-by: GitHub --- Manifest.toml | 270 +++++++++++++++++++++++++------------------------- 1 file changed, 137 insertions(+), 133 deletions(-) diff --git a/Manifest.toml b/Manifest.toml index 8c6ac3c79..136fa3da3 100644 --- a/Manifest.toml +++ b/Manifest.toml @@ -33,9 +33,9 @@ version = "0.4.5" [[deps.Accessors]] deps = ["CompositionsBase", "ConstructionBase", "InverseFunctions", "LinearAlgebra", "MacroTools", "Markdown"] -git-tree-sha1 = "b392ede862e506d451fc1616e79aa6f4c673dab8" +git-tree-sha1 = "96bed9b1b57cf750cca50c311a197e306816a1cc" uuid = "7d9f7c33-5ae7-4f3b-8dc6-eff91059b697" -version = "0.1.38" +version = "0.1.39" [deps.Accessors.extensions] AccessorsAxisKeysExt = "AxisKeys" @@ -100,9 +100,9 @@ version = "0.4.0" [[deps.ArrayInterface]] deps = ["Adapt", "LinearAlgebra"] -git-tree-sha1 = "d5140b60b87473df18cf4fe66382b7c3596df047" +git-tree-sha1 = "017fcb757f8e921fb44ee063a7aafe5f89b86dd1" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.17.1" +version = "7.18.0" [deps.ArrayInterface.extensions] ArrayInterfaceBandedMatricesExt = "BandedMatrices" @@ -132,19 +132,19 @@ version = "7.17.1" [[deps.ArrayLayouts]] deps = ["FillArrays", "LinearAlgebra"] -git-tree-sha1 = "492681bc44fac86804706ddb37da10880a2bd528" +git-tree-sha1 = "2bf6e01f453284cb61c312836b4680331ddfc44b" uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a" -version = "1.10.4" +version = "1.11.0" weakdeps = ["SparseArrays"] [deps.ArrayLayouts.extensions] ArrayLayoutsSparseArraysExt = "SparseArrays" [[deps.Arrow]] -deps = ["ArrowTypes", "BitIntegers", "CodecLz4", "CodecZstd", "ConcurrentUtilities", "DataAPI", "Dates", "EnumX", "Mmap", "PooledArrays", "SentinelArrays", "Tables", "TimeZones", "TranscodingStreams", "UUIDs"] -git-tree-sha1 = "a3ae633a80f26751041e8c17c091c9e910d5537d" +deps = ["ArrowTypes", "BitIntegers", "CodecLz4", "CodecZstd", "ConcurrentUtilities", "DataAPI", "Dates", "EnumX", "Mmap", "PooledArrays", "SentinelArrays", "StringViews", "Tables", "TimeZones", "TranscodingStreams", "UUIDs"] +git-tree-sha1 = "00f0b3f05bc33cc5b68db6cc22e4a7b16b65e505" uuid = "69666777-d1a9-59fb-9406-91d4454c9d45" -version = "2.7.4" +version = "2.8.0" [[deps.ArrowTypes]] deps = ["Sockets", "UUIDs"] @@ -243,9 +243,9 @@ version = "1.1.1" [[deps.CairoMakie]] deps = ["CRC32c", "Cairo", "Cairo_jll", "Colors", "FileIO", "FreeType", "GeometryBasics", "LinearAlgebra", "Makie", "PrecompileTools"] -git-tree-sha1 = "c3161fbfe99d9d7ee121cf2017d49966b152857c" +git-tree-sha1 = "0afa2b4ac444b9412130d68493941e1af462e26a" uuid = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0" -version = "0.12.16" +version = "0.12.18" [[deps.Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] @@ -253,11 +253,6 @@ git-tree-sha1 = "009060c9a6168704143100f36ab08f06c2af4642" uuid = "83423d85-b0ee-5818-9007-b63ccbeb887a" version = "1.18.2+1" -[[deps.Cassette]] -git-tree-sha1 = "f8764df8d9d2aec2812f009a1ac39e46c33354b8" -uuid = "7057c7e9-c182-5462-911a-8362d720325c" -version = "0.3.14" - [[deps.ChainRulesCore]] deps = ["Compat", "LinearAlgebra"] git-tree-sha1 = "3e4b134270b372f2ed4d4d0e936aabaefc1802bc" @@ -371,9 +366,9 @@ version = "1.1.1+0" [[deps.ComponentArrays]] deps = ["Adapt", "ArrayInterface", "ChainRulesCore", "ConstructionBase", "ForwardDiff", "Functors", "LinearAlgebra", "StaticArrayInterface", "StaticArraysCore"] -git-tree-sha1 = "e9b355215c05eeaaa7bf7d2ae0d329074e3cb045" +git-tree-sha1 = "9921db9efec9f395210f02b56b87b93dbb6cfd2b" uuid = "b0b7db55-cfe3-40fc-9ded-d10e2dbeff66" -version = "0.15.19" +version = "0.15.20" [deps.ComponentArrays.extensions] ComponentArraysGPUArraysExt = "GPUArrays" @@ -411,9 +406,9 @@ version = "0.2.3" [[deps.ConcurrentUtilities]] deps = ["Serialization", "Sockets"] -git-tree-sha1 = "ea32b83ca4fefa1768dc84e504cc0a94fb1ab8d1" +git-tree-sha1 = "f36e5e8fdffcb5646ea5da81495a5a7566005127" uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" -version = "2.4.2" +version = "2.4.3" [[deps.Conda]] deps = ["Downloads", "JSON", "VersionParsing"] @@ -512,9 +507,9 @@ version = "1.6.3" [[deps.DiffEqBase]] deps = ["ArrayInterface", "ConcreteStructs", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "FastClosures", "FastPower", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "Setfield", "Static", "StaticArraysCore", "Statistics", "TruncatedStacktraces"] -git-tree-sha1 = "b7dbeaa770bad0980ddddf606de814cff2acb3bc" +git-tree-sha1 = "b1e23a7fe7371934d9d538114a7e7166c1d09e05" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.160.0" +version = "6.161.0" [deps.DiffEqBase.extensions] DiffEqBaseCUDAExt = "CUDA" @@ -564,21 +559,21 @@ version = "1.15.1" [[deps.DifferentiationInterface]] deps = ["ADTypes", "LinearAlgebra"] -git-tree-sha1 = "38b6508ce802f4113401081a42549047812c2a2c" +git-tree-sha1 = "7ffe68edc2a4ad0ff2eeb5a32cc99ab45746fe3d" uuid = "a0c0ee7d-e4b9-4e03-894e-1c5f64a51d63" -version = "0.6.24" +version = "0.6.27" [deps.DifferentiationInterface.extensions] DifferentiationInterfaceChainRulesCoreExt = "ChainRulesCore" DifferentiationInterfaceDiffractorExt = "Diffractor" - DifferentiationInterfaceEnzymeExt = "Enzyme" + DifferentiationInterfaceEnzymeExt = ["EnzymeCore", "Enzyme"] DifferentiationInterfaceFastDifferentiationExt = "FastDifferentiation" DifferentiationInterfaceFiniteDiffExt = "FiniteDiff" DifferentiationInterfaceFiniteDifferencesExt = "FiniteDifferences" - DifferentiationInterfaceForwardDiffExt = "ForwardDiff" + DifferentiationInterfaceForwardDiffExt = ["ForwardDiff", "DiffResults"] DifferentiationInterfaceMooncakeExt = "Mooncake" DifferentiationInterfacePolyesterForwardDiffExt = "PolyesterForwardDiff" - DifferentiationInterfaceReverseDiffExt = "ReverseDiff" + DifferentiationInterfaceReverseDiffExt = ["ReverseDiff", "DiffResults"] DifferentiationInterfaceSparseArraysExt = "SparseArrays" DifferentiationInterfaceSparseMatrixColoringsExt = "SparseMatrixColorings" DifferentiationInterfaceStaticArraysExt = "StaticArrays" @@ -588,8 +583,10 @@ version = "0.6.24" [deps.DifferentiationInterface.weakdeps] ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" + DiffResults = "163ba53b-c6d8-5494-b064-1a9d43ac40c5" Diffractor = "9f5e2b26-1114-432f-b630-d3fe2085c51c" Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9" + EnzymeCore = "f151be2c-9106-41f4-ab19-57ee4f262869" FastDifferentiation = "eb9bf01b-bf85-4b60-bf87-ee5de06c00be" FiniteDiff = "6a86dc24-6348-571c-b903-95158fe2bd41" FiniteDifferences = "26cc04aa-876d-5657-8c51-4c34ba976000" @@ -615,9 +612,9 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[deps.Distributions]] deps = ["AliasTables", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns"] -git-tree-sha1 = "3101c32aab536e7a27b1763c0797dba151b899ad" +git-tree-sha1 = "4b138e4643b577ccf355377c2bc70fa975af25de" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.113" +version = "0.25.115" [deps.Distributions.extensions] DistributionsChainRulesCoreExt = "ChainRulesCore" @@ -652,9 +649,9 @@ uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56" version = "1.0.4" [[deps.EnzymeCore]] -git-tree-sha1 = "2c366bfe21936e8f44b607eb86a1f4c110f0d841" +git-tree-sha1 = "0cdb7af5c39e92d78a0ee8d0a447d32f7593137e" uuid = "f151be2c-9106-41f4-ab19-57ee4f262869" -version = "0.8.7" +version = "0.8.8" weakdeps = ["Adapt"] [deps.EnzymeCore.extensions] @@ -668,9 +665,9 @@ version = "2.2.8" [[deps.Expat_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "cc5231d52eb1771251fbd37171dbc408bcc8a1b6" +git-tree-sha1 = "e51db81749b0777b2147fbe7b783ee79045b8e99" uuid = "2e619515-83b5-522b-bb60-26c02a35a201" -version = "2.6.4+0" +version = "2.6.4+1" [[deps.ExprTools]] git-tree-sha1 = "27415f162e6028e81c72b82ef756bf321213b6ec" @@ -824,9 +821,9 @@ version = "0.8.5" [[deps.Fontconfig_jll]] deps = ["Artifacts", "Bzip2_jll", "Expat_jll", "FreeType2_jll", "JLLWrappers", "Libdl", "Libuuid_jll", "Zlib_jll"] -git-tree-sha1 = "db16beca600632c95fc8aca29890d83788dd8b23" +git-tree-sha1 = "21fac3c77d7b5a9fc03b0ec503aa1a6392c34d2b" uuid = "a3f928ae-7b40-5064-980b-68af3947d34b" -version = "2.13.96+0" +version = "2.15.0+0" [[deps.Format]] git-tree-sha1 = "9c68794ef81b08086aeb32eeaf33531668d5f5fc" @@ -863,15 +860,9 @@ version = "0.10.6" [[deps.FriBidi_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "1ed150b39aebcc805c26b93a8d0122c940f64ce2" +git-tree-sha1 = "846f7026a9decf3679419122b49f8a1fdb48d2d5" uuid = "559328eb-81f9-559d-9380-de523a88c83c" -version = "1.0.14+0" - -[[deps.FunctionProperties]] -deps = ["Cassette", "DiffRules"] -git-tree-sha1 = "bf7c740307eb0ee80e05d8aafbd0c5a901578398" -uuid = "f62d2435-5019-4c03-9749-2d4c77af0cbc" -version = "0.1.2" +version = "1.0.16+0" [[deps.FunctionWrappers]] git-tree-sha1 = "d62485945ce5ae9c0c48f124a84998d755bae00e" @@ -906,10 +897,10 @@ uuid = "68eda718-8dee-11e9-39e7-89f7f65f511f" version = "0.4.2" [[deps.GeoInterface]] -deps = ["Extents", "GeoFormatTypes"] -git-tree-sha1 = "826b4fd69438d9ce4d2b19de6bc2f970f45f0f88" +deps = ["DataAPI", "Extents", "GeoFormatTypes"] +git-tree-sha1 = "f4ee66b6b1872a4ca53303fbb51d158af1bf88d4" uuid = "cf35fbd7-0cd7-5166-be24-54bfbe79505f" -version = "1.3.8" +version = "1.4.0" [[deps.GeometryBasics]] deps = ["EarCut_jll", "Extents", "GeoInterface", "IterTools", "LinearAlgebra", "StaticArrays", "StructArrays", "Tables"] @@ -931,9 +922,9 @@ version = "5.2.2+0" [[deps.Glib_jll]] deps = ["Artifacts", "Gettext_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Libiconv_jll", "Libmount_jll", "PCRE2_jll", "Zlib_jll"] -git-tree-sha1 = "b36c7e110080ae48fdef61b0c31e6b17ada23b33" +git-tree-sha1 = "b0036b392358c80d2d2124746c2bf3d48d457938" uuid = "7746bdde-850d-59dc-9ae8-88ece973131d" -version = "2.82.2+0" +version = "2.82.4+0" [[deps.Glob]] git-tree-sha1 = "97285bbd5230dd766e9ef6749b80fc617126d496" @@ -971,15 +962,15 @@ version = "1.0.2" [[deps.HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll"] -git-tree-sha1 = "401e4f3f30f43af2c8478fc008da50096ea5240f" +git-tree-sha1 = "55c53be97790242c29031e5cd45e8ac296dadda3" uuid = "2e76f6c2-a576-52d4-95c1-20adfe4de566" -version = "8.3.1+0" +version = "8.5.0+0" [[deps.HiGHS]] deps = ["HiGHS_jll", "MathOptInterface", "PrecompileTools", "SparseArrays"] -git-tree-sha1 = "02fad6652a24cd1356c5dc000c3cca297e13482a" +git-tree-sha1 = "5360ef81c3952f29624ec75ad0045d079c6379f3" uuid = "87dc4568-4c63-4d18-b0c0-bb2238e4078b" -version = "1.12.1" +version = "1.12.2" [[deps.HiGHS_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Zlib_jll"] @@ -1100,9 +1091,9 @@ weakdeps = ["Unitful"] [[deps.IntervalArithmetic]] deps = ["CRlibm_jll", "LinearAlgebra", "MacroTools", "RoundingEmulator"] -git-tree-sha1 = "24c095b1ec7ee58b936985d31d5df92f9b9cfebb" +git-tree-sha1 = "3a272409c5f7fb864f830b3bb231b0a4d32747eb" uuid = "d1acc4aa-44c8-5952-acd4-ba5d80a2a253" -version = "0.22.19" +version = "0.22.20" weakdeps = ["DiffRules", "ForwardDiff", "IntervalSets", "RecipesBase"] [deps.IntervalArithmetic.extensions] @@ -1133,9 +1124,9 @@ weakdeps = ["Dates", "Test"] InverseFunctionsTestExt = "Test" [[deps.InvertedIndices]] -git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038" +git-tree-sha1 = "6da3c4316095de0f5ee2ebd875df8721e7e0bdbe" uuid = "41ab1584-1d38-5bbf-9106-f11c6c58b48f" -version = "1.3.0" +version = "1.3.1" [[deps.IrrationalConstants]] git-tree-sha1 = "630b497eafcc20001bba38a4651b327dcfc491d2" @@ -1194,9 +1185,9 @@ version = "0.1.5" [[deps.JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "25ee0be4d43d0269027024d75a24c24d6c6e590c" +git-tree-sha1 = "ef10afc9f4b942bcd75f4c3bc9d9e8d802944c23" uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" -version = "3.0.4+0" +version = "3.1.0+0" [[deps.JuMP]] deps = ["LinearAlgebra", "MacroTools", "MathOptInterface", "MutableArithmetics", "OrderedCollections", "PrecompileTools", "Printf", "SparseArrays"] @@ -1242,9 +1233,9 @@ version = "3.100.2+0" [[deps.LERC_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "36bdbc52f13a7d1dcb0f3cd694e01677a515655b" +git-tree-sha1 = "4ec1e8fac04150b570e315baaa68950e368a803d" uuid = "88015f11-f218-50d7-93a8-a6af411a945d" -version = "4.0.0+0" +version = "4.0.0+1" [[deps.LLVMOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -1271,9 +1262,9 @@ version = "0.1.17" [[deps.LazyArrays]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "MacroTools", "SparseArrays"] -git-tree-sha1 = "d168f757c5043240005d507ff866e801944c4690" +git-tree-sha1 = "f289bee714e11708df257c57514585863aa02b33" uuid = "5078a376-72f3-5289-bfd5-ec5146d43c02" -version = "2.2.4" +version = "2.3.1" [deps.LazyArrays.extensions] LazyArraysBandedMatricesExt = "BandedMatrices" @@ -1341,9 +1332,9 @@ uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb" [[deps.Libffi_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "0b4a5d71f3e5200a7dff793393e09dfc2d874290" +git-tree-sha1 = "27ecae93dd25ee0909666e6835051dd684cc035e" uuid = "e9f186c6-92d2-5b65-8a66-fee21dc1b490" -version = "3.2.2+1" +version = "3.2.2+2" [[deps.Libgcrypt_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgpg_error_jll"] @@ -1359,9 +1350,9 @@ version = "1.7.0+0" [[deps.Libgpg_error_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "c6ce1e19f3aec9b59186bdf06cdf3c4fc5f5f3e6" +git-tree-sha1 = "a7f43994b47130e4f491c3b2dbe78fe9e2aed2b3" uuid = "7add5ba3-2f88-524e-9cd5-f83b8a55f7b8" -version = "1.50.0+0" +version = "1.51.0+0" [[deps.Libiconv_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -1445,9 +1436,9 @@ version = "2.38.0" [[deps.LogExpFunctions]] deps = ["DocStringExtensions", "IrrationalConstants", "LinearAlgebra"] -git-tree-sha1 = "a2d09619db4e765091ee5c6ffe8872849de0feea" +git-tree-sha1 = "13ca9e2586b89836fd20cccf56e57e2b9ae7f38f" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" -version = "0.3.28" +version = "0.3.29" [deps.LogExpFunctions.extensions] LogExpFunctionsChainRulesCoreExt = "ChainRulesCore" @@ -1510,15 +1501,15 @@ version = "0.5.13" [[deps.Makie]] deps = ["Animations", "Base64", "CRC32c", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "Dates", "DelaunayTriangulation", "Distributions", "DocStringExtensions", "Downloads", "FFMPEG_jll", "FileIO", "FilePaths", "FixedPointNumbers", "Format", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageBase", "ImageIO", "InteractiveUtils", "Interpolations", "IntervalSets", "InverseFunctions", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MacroTools", "MakieCore", "Markdown", "MathTeXEngine", "Observables", "OffsetArrays", "Packing", "PlotUtils", "PolygonOps", "PrecompileTools", "Printf", "REPL", "Random", "RelocatableFolders", "Scratch", "ShaderAbstractions", "Showoff", "SignedDistanceFields", "SparseArrays", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "TriplotBase", "UnicodeFun", "Unitful"] -git-tree-sha1 = "5e4e0e027642293da251bf35dac408d692ccba8b" +git-tree-sha1 = "be3051d08b78206fb5e688e8d70c9e84d0264117" uuid = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a" -version = "0.21.16" +version = "0.21.18" [[deps.MakieCore]] deps = ["ColorTypes", "GeometryBasics", "IntervalSets", "Observables"] -git-tree-sha1 = "ae4dbe0fcf1594ed98594e5f4ee685295a2a6f74" +git-tree-sha1 = "9019b391d7d086e841cbeadc13511224bd029ab3" uuid = "20f20a25-4f0e-4fdf-b5d1-57303727442b" -version = "0.8.10" +version = "0.8.12" [[deps.ManualMemory]] git-tree-sha1 = "bcaef4fc7a0cfe2cba636d84cda54b5e4e4ca3cd" @@ -1639,9 +1630,9 @@ version = "1.2.0" [[deps.NonlinearSolve]] deps = ["ADTypes", "ArrayInterface", "BracketingNonlinearSolve", "CommonSolve", "ConcreteStructs", "DiffEqBase", "DifferentiationInterface", "FastClosures", "FiniteDiff", "ForwardDiff", "LineSearch", "LinearAlgebra", "LinearSolve", "NonlinearSolveBase", "NonlinearSolveFirstOrder", "NonlinearSolveQuasiNewton", "NonlinearSolveSpectralMethods", "PrecompileTools", "Preferences", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseMatrixColorings", "StaticArraysCore", "SymbolicIndexingInterface"] -git-tree-sha1 = "e646d238e65928630a5f557c0676051a11504c9d" +git-tree-sha1 = "d0caebdb5a31e1a11ca9f7f189cdbf341ac89f0e" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "4.2.0" +version = "4.3.0" [deps.NonlinearSolve.extensions] NonlinearSolveFastLevenbergMarquardtExt = "FastLevenbergMarquardt" @@ -1670,10 +1661,10 @@ version = "4.2.0" Sundials = "c3572dad-4567-51f8-b174-8c6c989267f4" [[deps.NonlinearSolveBase]] -deps = ["ADTypes", "Adapt", "ArrayInterface", "CommonSolve", "Compat", "ConcreteStructs", "DifferentiationInterface", "EnzymeCore", "FastClosures", "FunctionProperties", "LinearAlgebra", "Markdown", "MaybeInplace", "Preferences", "Printf", "RecursiveArrayTools", "SciMLBase", "SciMLJacobianOperators", "SciMLOperators", "StaticArraysCore", "SymbolicIndexingInterface", "TimerOutputs"] -git-tree-sha1 = "46772fc296d9f16c3ab78a8ef00008ab075de677" +deps = ["ADTypes", "Adapt", "ArrayInterface", "CommonSolve", "Compat", "ConcreteStructs", "DifferentiationInterface", "EnzymeCore", "FastClosures", "LinearAlgebra", "Markdown", "MaybeInplace", "Preferences", "Printf", "RecursiveArrayTools", "SciMLBase", "SciMLJacobianOperators", "SciMLOperators", "StaticArraysCore", "SymbolicIndexingInterface", "TimerOutputs"] +git-tree-sha1 = "5bca24ce7b0c034dcbdc6ad6d658b02e0eed566e" uuid = "be0214bd-f91f-a760-ac4e-3421ce2b2da0" -version = "1.3.3" +version = "1.4.0" [deps.NonlinearSolveBase.extensions] NonlinearSolveBaseBandedMatricesExt = "BandedMatrices" @@ -1695,21 +1686,29 @@ version = "1.3.3" [[deps.NonlinearSolveFirstOrder]] deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConcreteStructs", "DiffEqBase", "FiniteDiff", "ForwardDiff", "LineSearch", "LinearAlgebra", "LinearSolve", "MaybeInplace", "NonlinearSolveBase", "PrecompileTools", "Reexport", "SciMLBase", "SciMLJacobianOperators", "Setfield", "StaticArraysCore"] -git-tree-sha1 = "05a42691900f8f14e930478d5638a5f0fc973601" +git-tree-sha1 = "a1ea35ab0bcc99753e26d574ba1e339f19d100fa" uuid = "5959db7a-ea39-4486-b5fe-2dd0bf03d60d" -version = "1.1.0" +version = "1.2.0" [[deps.NonlinearSolveQuasiNewton]] deps = ["ArrayInterface", "CommonSolve", "ConcreteStructs", "DiffEqBase", "LinearAlgebra", "LinearSolve", "MaybeInplace", "NonlinearSolveBase", "PrecompileTools", "Reexport", "SciMLBase", "SciMLOperators", "StaticArraysCore"] -git-tree-sha1 = "066d4940938f4bb5fd1ce146e61a373f40b89d31" +git-tree-sha1 = "8f14b848afcfc0a2941cd3cca1bef04c987465bb" uuid = "9a2c21bd-3a47-402d-9113-8faf9a0ee114" -version = "1.0.0" +version = "1.1.0" +weakdeps = ["ForwardDiff"] + + [deps.NonlinearSolveQuasiNewton.extensions] + NonlinearSolveQuasiNewtonForwardDiffExt = "ForwardDiff" [[deps.NonlinearSolveSpectralMethods]] deps = ["CommonSolve", "ConcreteStructs", "DiffEqBase", "LineSearch", "MaybeInplace", "NonlinearSolveBase", "PrecompileTools", "Reexport", "SciMLBase"] -git-tree-sha1 = "cc97c44e396ab820401c8c404bc1fd18d4c884bd" +git-tree-sha1 = "f28b1ab17b5f15eb2b174eaf8813cf17f0b3e6c0" uuid = "26075421-4e9a-44e1-8bd1-420ed7ad02b2" -version = "1.0.0" +version = "1.1.0" +weakdeps = ["ForwardDiff"] + + [deps.NonlinearSolveSpectralMethods.extensions] + NonlinearSolveSpectralMethodsForwardDiffExt = "ForwardDiff" [[deps.Observables]] git-tree-sha1 = "7438a59546cf62428fc9d1bc94729146d37a7225" @@ -1717,9 +1716,9 @@ uuid = "510215fc-4207-5dde-b226-833fc4488ee2" version = "0.5.5" [[deps.OffsetArrays]] -git-tree-sha1 = "1a27764e945a152f7ca7efa04de513d473e9542e" +git-tree-sha1 = "5e1897147d1ff8d98883cda2be2187dcf57d8f0c" uuid = "6fe1bfb0-de20-5000-8ca7-80f57d26f881" -version = "1.14.1" +version = "1.15.0" weakdeps = ["Adapt"] [deps.OffsetArrays.extensions] @@ -1777,16 +1776,16 @@ uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" version = "1.7.0" [[deps.OrdinaryDiffEqBDF]] -deps = ["ArrayInterface", "DiffEqBase", "FastBroadcast", "LinearAlgebra", "MacroTools", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqNonlinearSolve", "OrdinaryDiffEqSDIRK", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "StaticArrays", "TruncatedStacktraces"] -git-tree-sha1 = "b4498d40bf35da0b6d22652ff2e9d8820590b3c6" +deps = ["ADTypes", "ArrayInterface", "DiffEqBase", "FastBroadcast", "LinearAlgebra", "MacroTools", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqNonlinearSolve", "OrdinaryDiffEqSDIRK", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "StaticArrays", "TruncatedStacktraces"] +git-tree-sha1 = "86ccea2bd0fdfa5570172a9717061f6417e21dea" uuid = "6ad6398a-0878-4a85-9266-38940aa047c8" -version = "1.1.2" +version = "1.2.0" [[deps.OrdinaryDiffEqCore]] deps = ["ADTypes", "Accessors", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "EnumX", "FastBroadcast", "FastClosures", "FastPower", "FillArrays", "FunctionWrappersWrappers", "InteractiveUtils", "LinearAlgebra", "Logging", "MacroTools", "MuladdMacro", "Polyester", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "SimpleUnPack", "Static", "StaticArrayInterface", "StaticArraysCore", "SymbolicIndexingInterface", "TruncatedStacktraces"] -git-tree-sha1 = "c7f395034602c3e4d40ece93dc2c9f066f0ce61f" +git-tree-sha1 = "72c77ae685fddb6291fff22dba13f4f32602475c" uuid = "bbf590c4-e513-4bbe-9b18-05decba2e5d8" -version = "1.13.0" +version = "1.14.1" weakdeps = ["EnzymeCore"] [deps.OrdinaryDiffEqCore.extensions] @@ -1794,9 +1793,9 @@ weakdeps = ["EnzymeCore"] [[deps.OrdinaryDiffEqDifferentiation]] deps = ["ADTypes", "ArrayInterface", "DiffEqBase", "FastBroadcast", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "LinearAlgebra", "LinearSolve", "OrdinaryDiffEqCore", "SciMLBase", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays"] -git-tree-sha1 = "8977f283a7d89c5d5c06c933467ed4af0a99f2f7" +git-tree-sha1 = "e4adff09a6d47b74c16e7e08f10fa32000e2e5ed" uuid = "4302a76b-040a-498a-8c04-15b101fed76b" -version = "1.2.0" +version = "1.3.0" [[deps.OrdinaryDiffEqLowOrderRK]] deps = ["DiffEqBase", "FastBroadcast", "LinearAlgebra", "MuladdMacro", "OrdinaryDiffEqCore", "RecursiveArrayTools", "Reexport", "SciMLBase", "Static"] @@ -1812,15 +1811,15 @@ version = "1.3.0" [[deps.OrdinaryDiffEqRosenbrock]] deps = ["ADTypes", "DiffEqBase", "FastBroadcast", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "LinearSolve", "MacroTools", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "Polyester", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "Static"] -git-tree-sha1 = "760a51a626d0065455847e4a3f788b07e86e5090" +git-tree-sha1 = "749518f27e886164ee07e6df49b631beaca8c9ac" uuid = "43230ef6-c299-4910-a778-202eb28ce4ce" -version = "1.3.1" +version = "1.4.0" [[deps.OrdinaryDiffEqSDIRK]] -deps = ["DiffEqBase", "FastBroadcast", "LinearAlgebra", "MacroTools", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqNonlinearSolve", "RecursiveArrayTools", "Reexport", "SciMLBase", "TruncatedStacktraces"] -git-tree-sha1 = "f6683803a58de600ab7a26d2f49411c9923e9721" +deps = ["ADTypes", "DiffEqBase", "FastBroadcast", "LinearAlgebra", "MacroTools", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqNonlinearSolve", "RecursiveArrayTools", "Reexport", "SciMLBase", "TruncatedStacktraces"] +git-tree-sha1 = "45eed1444fbfa510e1806d4153f83bd862d2d035" uuid = "2d112036-d095-4a1e-ab9a-08536f3ecdbf" -version = "1.1.0" +version = "1.2.0" [[deps.OrdinaryDiffEqTsit5]] deps = ["DiffEqBase", "FastBroadcast", "LinearAlgebra", "MuladdMacro", "OrdinaryDiffEqCore", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "Static", "TruncatedStacktraces"] @@ -1830,9 +1829,9 @@ version = "1.1.0" [[deps.OteraEngine]] deps = ["Markdown", "Pkg", "TOML"] -git-tree-sha1 = "77181f04ea21edf7c63d74069d63453e171bbe4f" +git-tree-sha1 = "dd2b63bec2acbfbe758d8795506787fca50b9f96" uuid = "b2d7f28f-acd6-4007-8b26-bc27716e5513" -version = "0.6.0" +version = "0.6.1" [[deps.PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -1853,9 +1852,9 @@ version = "0.4.3" [[deps.PackageCompiler]] deps = ["Artifacts", "Glob", "LazyArtifacts", "Libdl", "Pkg", "Printf", "RelocatableFolders", "TOML", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "feea963335170588a2c5bbac7bacde13b1ec524e" +git-tree-sha1 = "5d13e5b70011762b74f86fc08385303589f80272" uuid = "9b87118b-4619-50d2-8e1e-99f35a4d4d9d" -version = "2.1.24" +version = "2.2.0" [[deps.PackageExtensionCompat]] git-tree-sha1 = "fb28e33b8a95c4cee25ce296c817d89cc2e53518" @@ -1877,9 +1876,9 @@ version = "0.5.12" [[deps.Pango_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "FriBidi_jll", "Glib_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl"] -git-tree-sha1 = "e127b609fb9ecba6f201ba7ab753d5a605d53801" +git-tree-sha1 = "ed6834e95bd326c52d5675b4181386dfbe885afb" uuid = "36c8627f-9965-5494-a995-c6b170f724f3" -version = "1.54.1+0" +version = "1.55.5+0" [[deps.Parameters]] deps = ["OrderedCollections", "UnPack"] @@ -2160,15 +2159,15 @@ version = "1.6.1" [[deps.SQLite_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Zlib_jll"] -git-tree-sha1 = "004fffbe2711abdc7263a980bbb1af9620781dd9" +git-tree-sha1 = "e84fab7d16107342d7638fbd519151d9a0d80720" uuid = "76ed43ae-9a5d-5a62-8c75-30186b810ce8" -version = "3.45.3+0" +version = "3.47.2+0" [[deps.SciMLBase]] deps = ["ADTypes", "Accessors", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "Expronicon", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface"] -git-tree-sha1 = "f48e0239fbb7799e8d81133ea71a726ec510c9ef" +git-tree-sha1 = "fd0794f59136050f4734f7af7818fec2f82bdcfc" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "2.65.1" +version = "2.69.0" [deps.SciMLBase.extensions] SciMLBaseChainRulesCoreExt = "ChainRulesCore" @@ -2220,9 +2219,9 @@ version = "1.2.1" [[deps.SentinelArrays]] deps = ["Dates", "Random"] -git-tree-sha1 = "d0553ce4031a081cc42387a9b9c8441b7d99f32d" +git-tree-sha1 = "712fb0231ee6f9120e005ccd56297abbc053e7e0" uuid = "91c51154-3ec4-41a3-a24f-3f23e20d615c" -version = "1.4.7" +version = "1.4.8" [[deps.Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" @@ -2257,9 +2256,9 @@ version = "0.4.0" [[deps.SimpleNonlinearSolve]] deps = ["ADTypes", "ArrayInterface", "BracketingNonlinearSolve", "CommonSolve", "ConcreteStructs", "DifferentiationInterface", "FastClosures", "FiniteDiff", "ForwardDiff", "LineSearch", "LinearAlgebra", "MaybeInplace", "NonlinearSolveBase", "PrecompileTools", "Reexport", "SciMLBase", "Setfield", "StaticArraysCore"] -git-tree-sha1 = "f7e2042e0b68c6bb19a0a1594839792737f51d84" +git-tree-sha1 = "a3868a6add9f5989d1f4bd21de0333ef89fb9d9f" uuid = "727e6d20-b764-4bd8-a329-72de5adea6c7" -version = "2.0.0" +version = "2.1.0" [deps.SimpleNonlinearSolve.extensions] SimpleNonlinearSolveChainRulesCoreExt = "ChainRulesCore" @@ -2332,9 +2331,9 @@ version = "0.6.9" [[deps.SparseDiffTools]] deps = ["ADTypes", "Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "PackageExtensionCompat", "Random", "Reexport", "SciMLOperators", "Setfield", "SparseArrays", "StaticArrayInterface", "StaticArrays", "UnPack", "VertexSafeGraphs"] -git-tree-sha1 = "b906758c107b049b6b71599b9f928d9b14e5554a" +git-tree-sha1 = "d79802152d958607f414f5447cb25e314db979c0" uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804" -version = "2.23.0" +version = "2.23.1" [deps.SparseDiffTools.extensions] SparseDiffToolsEnzymeExt = "Enzyme" @@ -2368,9 +2367,9 @@ version = "0.3.9" [[deps.SpecialFunctions]] deps = ["IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"] -git-tree-sha1 = "2f5d4697f21388cbe1ff299430dd169ef97d7e14" +git-tree-sha1 = "64cca0c26b4f31ba18f13f6c12af7c85f478cfde" uuid = "276daf66-3868-5448-9aa4-cd146d93841b" -version = "2.4.0" +version = "2.5.0" weakdeps = ["ChainRulesCore"] [deps.SpecialFunctions.extensions] @@ -2407,9 +2406,9 @@ weakdeps = ["OffsetArrays", "StaticArrays"] [[deps.StaticArrays]] deps = ["LinearAlgebra", "PrecompileTools", "Random", "StaticArraysCore"] -git-tree-sha1 = "777657803913ffc7e8cc20f0fd04b634f871af8f" +git-tree-sha1 = "7c01731da8ab6d3094c4d44c9057b00932459255" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.9.8" +version = "1.9.9" weakdeps = ["ChainRulesCore", "Statistics"] [deps.StaticArrays.extensions] @@ -2433,10 +2432,10 @@ uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" version = "1.7.0" [[deps.StatsBase]] -deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] -git-tree-sha1 = "5cf7606d6cef84b543b483848d4ae08ad9832b21" +deps = ["AliasTables", "DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] +git-tree-sha1 = "29321314c920c26684834965ec2ce0dacc9cf8e5" uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" -version = "0.34.3" +version = "0.34.4" [[deps.StatsFuns]] deps = ["HypergeometricFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"] @@ -2461,6 +2460,11 @@ git-tree-sha1 = "a6b1675a536c5ad1a60e5a5153e1fee12eb146e3" uuid = "892a3eda-7b42-436c-8928-eab12a02cf0e" version = "0.4.0" +[[deps.StringViews]] +git-tree-sha1 = "ec4bf39f7d25db401bcab2f11d2929798c0578e5" +uuid = "354b36f9-a18e-4713-926e-db85100087ba" +version = "1.3.4" + [[deps.StructArrays]] deps = ["ConstructionBase", "DataAPI", "Tables"] git-tree-sha1 = "9537ef82c42cdd8c5d443cbc359110cbb36bae10" @@ -2499,9 +2503,9 @@ version = "7.2.1+1" [[deps.SymbolicIndexingInterface]] deps = ["Accessors", "ArrayInterface", "RuntimeGeneratedFunctions", "StaticArraysCore"] -git-tree-sha1 = "6c6761e08bf5a270905cdd065be633abfa1b155b" +git-tree-sha1 = "8db233b54917e474165d582bef2244fa040e0a56" uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5" -version = "0.3.35" +version = "0.3.36" [[deps.TOML]] deps = ["Dates"] @@ -2510,9 +2514,9 @@ version = "1.0.3" [[deps.TZJData]] deps = ["Artifacts"] -git-tree-sha1 = "36b40607bf2bf856828690e097e1c799623b0602" +git-tree-sha1 = "006a327222dda856e2304959e566ff0104ac8594" uuid = "dc5dba14-91b3-4cab-a142-028a31da12f7" -version = "1.3.0+2024b" +version = "1.3.1+2024b" [[deps.TableTraits]] deps = ["IteratorInterfaceExtensions"] @@ -2572,15 +2576,15 @@ version = "0.5.2" [[deps.TiffImages]] deps = ["ColorTypes", "DataStructures", "DocStringExtensions", "FileIO", "FixedPointNumbers", "IndirectArrays", "Inflate", "Mmap", "OffsetArrays", "PkgVersion", "ProgressMeter", "SIMD", "UUIDs"] -git-tree-sha1 = "0248b1b2210285652fbc67fd6ced9bf0394bcfec" +git-tree-sha1 = "3c0faa42f2bd3c6d994b06286bba2328eae34027" uuid = "731e570b-9d59-4bfa-96dc-6df516fadf69" -version = "0.11.1" +version = "0.11.2" [[deps.TimeZones]] -deps = ["Dates", "Downloads", "InlineStrings", "Mocking", "Printf", "Scratch", "TZJData", "Unicode", "p7zip_jll"] -git-tree-sha1 = "33c771f2157712ff4c85931186a4984efbe58934" +deps = ["Artifacts", "Dates", "Downloads", "InlineStrings", "Mocking", "Printf", "Scratch", "TZJData", "Unicode", "p7zip_jll"] +git-tree-sha1 = "fcbcffdc11524d08523e92ae52214b29d90b50bb" uuid = "f269a46b-ccf7-5d73-abea-4c690281aa53" -version = "1.19.0" +version = "1.20.0" weakdeps = ["RecipesBase"] [deps.TimeZones.extensions] @@ -2588,9 +2592,9 @@ weakdeps = ["RecipesBase"] [[deps.TimerOutputs]] deps = ["ExprTools", "Printf"] -git-tree-sha1 = "3a6f063d690135f5c1ba351412c82bae4d1402bf" +git-tree-sha1 = "d7298ebdfa1654583468a487e8e83fae9d72dac3" uuid = "a759f4b9-e2f1-59dc-863e-4aeb61b1ea8f" -version = "0.5.25" +version = "0.5.26" [[deps.TranscodingStreams]] git-tree-sha1 = "0c45878dcfdcfa8480052b6ab162cdd138781742" @@ -2722,9 +2726,9 @@ version = "1.3.6+1" [[deps.Xorg_libXrender_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libX11_jll"] -git-tree-sha1 = "47e45cd78224c53109495b3e324df0c37bb61fbe" +git-tree-sha1 = "a490c6212a0e90d2d55111ac956f7c4fa9c277a6" uuid = "ea2f1a96-1ddc-540d-b46f-429655e07cfa" -version = "0.9.11+0" +version = "0.9.11+1" [[deps.Xorg_libpthread_stubs_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"]