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super-enhancer-code

Code for Nature Genetics correspondance, "Is a super-enhancer greater than the sum of its parts?" (2016).

Requred R packages:

  • data.table
  • ggplot2
  • DEoptim
  • reshape2

An R package for doing these analysis has now been created and is at:

https://github.com/ndukler/superEnhancerModelR