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<!DOCTYPE html>
<html lang="" xml:lang="">
<head>
<title>Reducción de dimensiones</title>
<meta charset="utf-8" />
<meta name="author" content="Leonardo Collado-Torres" />
<meta name="date" content="2020-08-05" />
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class: center, middle, inverse, title-slide
# <strong>Reducción de dimensiones </strong>
## <strong>Bioconductor</strong> para datos transcriptómicos de célula única (<strong>scRNA-seq</strong>) – <strong>CDSB2020</strong>
### <a href="http://lcolladotor.github.io/">Leonardo Collado-Torres</a>
### 2020-08-05
---
class: inverse
.center[
<a href="https://osca.bioconductor.org/"><img src="https://raw.githubusercontent.com/Bioconductor/OrchestratingSingleCellAnalysis-release/master/images/cover.png" style="width: 30%"/></a>
<a rel="license" href="http://creativecommons.org/licenses/by-nc-sa/4.0/"><img alt="Creative Commons License" style="border-width:0" src="https://i.creativecommons.org/l/by-nc-sa/4.0/88x31.png" /></a><br />This work is licensed under a <a rel="license" href="http://creativecommons.org/licenses/by-nc-sa/4.0/">Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License</a>.
<a href='https://clustrmaps.com/site/1b5pl' title='Visit tracker'><img src='//clustrmaps.com/map_v2.png?cl=ffffff&w=150&t=n&d=rP3KLyAMuzVNcJFL-_C-B0XnLNVy8Sp6a8HDaKEnSzc'/></a>
]
.footnote[Descarga los materiales con `usethis::use_course('comunidadbioinfo/cdsb2020')` o revisalos en línea vía [**comunidadbioinfo.github.io/cdsb2020**](http://comunidadbioinfo.github.io/cdsb2020).]
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---
# Diapositivas de Peter Hickey
Ve las diapositivas [aquí](https://docs.google.com/presentation/d/12CjvQ1beZVeCcMQqD6ptzd9YUHbHOksvy3lt_rvWyRs/edit)
---
class: middle
.center[
# ¡Gracias!
Las diapositivias fueron hechas con el paquete de R [**xaringan**](https://github.com/yihui/xaringan) y configuradas con [**xaringanthemer**](https://github.com/gadenbuie/xaringanthemer).
Este curso está basado en el libro [**Orchestrating Single Cell Analysis with Bioconductor**](https://osca.bioconductor.org/) de [Aaron Lun](https://www.linkedin.com/in/aaron-lun-869b5894/), [Robert Amezquita](https://robertamezquita.github.io/), [Stephanie Hicks](https://www.stephaniehicks.com/) y [Raphael Gottardo](http://rglab.org), además del [**curso de scRNA-seq para WEHI**](https://drive.google.com/drive/folders/1cn5d-Ey7-kkMiex8-74qxvxtCQT6o72h) creado por [Peter Hickey](https://www.peterhickey.org/).
Puedes encontrar los archivos para este taller en [comunidadbioinfo/cdsb2020](https://github.com/comunidadbioinfo/cdsb2020).
Instructor: [**Leonardo Collado-Torres**](http://lcolladotor.github.io/).
<a href="https://www.libd.org"><img src="img/LIBD_logo.jpg" style="width: 20%" /></a>
]
.footnote[Descarga los materiales con `usethis::use_course('comunidadbioinfo/cdsb2020')` o revisalos en línea vía [**comunidadbioinfo.github.io/cdsb2020**](http://comunidadbioinfo.github.io/cdsb2020).]
---
# Detalles de la sesión de R
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```r
options(width = 120)
sessioninfo::session_info()
```
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## ─ Session info ───────────────────────────────────────────────────────────────────────────────────────────────────────
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##
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## package * version date lib source
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## cli 2.0.2 2020-02-28 [1] CRAN (R 4.0.0)
## colorout * 1.2-2 2020-03-16 [1] Github (jalvesaq/colorout@726d681)
## crayon 1.3.4 2017-09-16 [1] CRAN (R 4.0.0)
## digest 0.6.25 2020-02-23 [1] CRAN (R 4.0.0)
## evaluate 0.14 2019-05-28 [1] CRAN (R 4.0.0)
## fansi 0.4.1 2020-01-08 [1] CRAN (R 4.0.0)
## glue 1.4.1 2020-05-13 [1] CRAN (R 4.0.0)
## htmltools 0.5.0 2020-06-16 [1] CRAN (R 4.0.2)
## knitr 1.29 2020-06-23 [1] CRAN (R 4.0.0)
## magrittr 1.5 2014-11-22 [1] CRAN (R 4.0.0)
## purrr 0.3.4 2020-04-17 [1] CRAN (R 4.0.0)
## rlang 0.4.7 2020-07-09 [1] CRAN (R 4.0.2)
## rmarkdown 2.3 2020-06-18 [1] CRAN (R 4.0.0)
## sessioninfo 1.1.1 2018-11-05 [1] CRAN (R 4.0.2)
## showtext 0.8-1 2020-05-25 [1] CRAN (R 4.0.2)
## showtextdb 3.0 2020-06-04 [1] CRAN (R 4.0.2)
## stringi 1.4.6 2020-02-17 [1] CRAN (R 4.0.0)
## stringr 1.4.0 2019-02-10 [1] CRAN (R 4.0.0)
## sysfonts 0.8.1 2020-05-08 [1] CRAN (R 4.0.0)
## whisker 0.4 2019-08-28 [1] CRAN (R 4.0.0)
## withr 2.2.0 2020-04-20 [1] CRAN (R 4.0.0)
## xaringan 0.16 2020-03-31 [1] CRAN (R 4.0.0)
## xaringanthemer * 0.3.0 2020-05-04 [1] CRAN (R 4.0.0)
## xfun 0.16 2020-07-24 [1] CRAN (R 4.0.2)
## yaml 2.2.1 2020-02-01 [1] CRAN (R 4.0.0)
##
## [1] /Library/Frameworks/R.framework/Versions/4.0/Resources/library
## [2] /Library/Frameworks/R.framework/Versions/4.0branch/Resources/library
```
]]
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