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halStats output is difficult to use #150

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diekhans opened this issue Jul 22, 2020 · 0 comments
Open

halStats output is difficult to use #150

diekhans opened this issue Jul 22, 2020 · 0 comments

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@diekhans
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many halStats options (e.g. --genomes, --sequences) output a single line of comma separate results. This doesn't work easily with Unix tools or any common library.

--sequenceStats attempts to create a CVS, however, it pads values with spaces, which is not valid.

It would be far better if halStats produced TSV and tab files, or optionally both

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