From b0065c6c08b13f44919247d830edef09bcafb110 Mon Sep 17 00:00:00 2001 From: Chang-Ho Kim <77651662+CHKim5@users.noreply.github.com> Date: Mon, 23 Aug 2021 10:36:12 +0900 Subject: [PATCH] Update README.md --- README.md | 25 +++++++++++++++++++++++-- 1 file changed, 23 insertions(+), 2 deletions(-) diff --git a/README.md b/README.md index 21e974c..59fa743 100644 --- a/README.md +++ b/README.md @@ -11,6 +11,8 @@ The package includes * Normality check (Shapiro Wilk test) +* Scheirer–Ray–Hare Test + * Volcano plot * Heatmap @@ -49,7 +51,9 @@ library(LMSstat) #### Used in * Simple statistics -* Barplot, Boxplot, Dotplot +* Barplot, Boxplot, Dotplot +* Volcano plot +* Scheirer–Ray–Hare Test * PERMANOVA * NMDS * PCA @@ -105,9 +109,10 @@ Classification<-read.csv("statT_G.csv",header = F) ``` Statfile<-Allstats(Data,Adjust_p_value = T, Adjust_method = "BH") ``` - ##### Adjustable parameters + * Adjust_p_value = T # Set True if adjustment is needed + * Adjust_method = F # Adjustment methods frequently used. c("holm", "hochberg", "hommel", "bonferroni", "BH", "BY","fdr", "none") ``` @@ -178,6 +183,22 @@ write.csv(Result,"Normality_test_Result.csv")

+### Scheirer–Ray–Hare Test + +``` +# csv files including significant variables (Multilevel, Group, interaction) and a Venn diagram are downloaded +SRH(Data) +``` +

+ +

+ +##### Adjustable parameters + +* Adjust_p_value = T # Set True if adjustment is needed +* Adjust_method = "BH" # Adjustment methods frequently used. c("holm", "hochberg", "hommel", "bonferroni", "BH", "BY","fdr", "none") + + ### Volcano plot ```