diff --git a/process.py b/process.py index 1f3917e..b6d5abf 100644 --- a/process.py +++ b/process.py @@ -193,7 +193,7 @@ def read_gisaid_log(log_file, submission_status_file): # Save submission status df submission_status.to_csv(submission_status_file, header = True, index = False) not_submitted = submission_status[~submission_status["gisaid_accession_epi_isl_id"].str.contains("EPI", na=False)].copy() - return not_submitted[["gs-sample_name", "gs-sequence_name"]] + return not_submitted[["gs-sample_name"]] # Check user credentials information def check_credentials(config_dict, database):