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assembly boxplots #43

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asczyrba opened this issue Oct 12, 2016 · 0 comments
Open

assembly boxplots #43

asczyrba opened this issue Oct 12, 2016 · 0 comments
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@asczyrba
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Boxplots:

  • larger labels
  • make labels black
  • generate (separate) PDFs for each plot
  • play with transparency for boxes
  • play with transparency for dots (goal: visualize density somehow)
  • do not plot outliers in boxplots (currently grey dots)
  • titles on all plots:

Boxplot containing all genomes

  • Recovered genome fraction (%) for each reference genomes (all genomes)

Boxplot containing only unique genomes

  • Recovered genome fraction (%) for each reference genomes (ANI <= 95%)

Boxplot containing only strains

  • Recovered genome fraction (%) for each reference genomes (ANI > 95%)
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