From c6fc4a6842ec6754d4afd6b7c2d4aa67657b3b6a Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Michael=20J=C3=A4hn?= <mjaehn@ethz.ch>
Date: Tue, 19 Sep 2023 09:27:30 +0200
Subject: [PATCH] Add flexpart-cosmo (#742)

---
 repos/c2sm/packages/flexpart-cosmo/package.py | 51 +++++++++++++++++++
 test/integration_test.py                      |  7 +++
 test/system_test.py                           |  7 +++
 3 files changed, 65 insertions(+)
 create mode 100644 repos/c2sm/packages/flexpart-cosmo/package.py

diff --git a/repos/c2sm/packages/flexpart-cosmo/package.py b/repos/c2sm/packages/flexpart-cosmo/package.py
new file mode 100644
index 0000000000..283c4b203a
--- /dev/null
+++ b/repos/c2sm/packages/flexpart-cosmo/package.py
@@ -0,0 +1,51 @@
+# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+#
+from spack import *
+from distutils.dir_util import copy_tree
+from llnl.util.filesystem import working_dir
+
+
+class FlexpartCosmo(MakefilePackage):
+    """flexpart is a Lagrangian dispersion model"""
+
+    homepage = 'https://github.com/C2SM-RCM/flexpart'
+    git = 'ssh://git@github.com/C2SM-RCM/flexpart.git'
+
+    version('main', branch='main')
+
+    depends_on('eccodes +fortran')
+    depends_on('netcdf-fortran')
+
+    conflicts('%gcc@:10')
+    conflicts('%nvhpc')
+    conflicts('%pgi')
+    conflicts('%cce')
+
+    build_directory = 'src'
+
+    makefile_file = "Makefile.spack"
+
+    @property
+    def build_targets(self):
+        return ['ncf=yes', 'VERBOSE=1']
+
+    def setup_build_environment(self, env):
+        env.set('GRIB_API', self.spec['eccodes'].prefix)
+        env.set('NETCDF', self.spec['netcdf-fortran'].prefix)
+
+    def build(self, spec, prefix):
+
+        with working_dir(self.build_directory):
+            make('-f', self.makefile_file)
+
+    def install(self, spec, prefix):
+        mkdir(prefix.bin)
+        mkdir(prefix.share)
+        mkdir(prefix.share + '/test/')
+        mkdir(prefix.share + '/options/')
+        copy_tree('options/', prefix.share + '/options/')
+        install('bin/FLEXPART', prefix.bin)
diff --git a/test/integration_test.py b/test/integration_test.py
index 0f5cd6c84f..7f894704c4 100644
--- a/test/integration_test.py
+++ b/test/integration_test.py
@@ -79,6 +79,9 @@ def test_fdb(self):
     def test_fdb_fortran(self):
         spack_info('fdb-fortran')
 
+    def test_flexpart_cosmo(self):
+        spack_info('flexpart-cosmo')
+
     def test_flexpart_fdb(self):
         spack_info('flexpart-fdb')
 
@@ -286,6 +289,10 @@ def test_fdb(self):
     def test_fdb_fortran(self):
         spack_spec('fdb-fortran')
 
+    @pytest.mark.no_tsa  # No compatible compiler available
+    def test_flexpart_cosmo(self):
+        spack_spec('flexpart-cosmo')
+
     def test_flexpart_fdb(self):
         spack_spec('flexpart-fdb')
 
diff --git a/test/system_test.py b/test/system_test.py
index 62efcc183a..f10d111ea0 100644
--- a/test/system_test.py
+++ b/test/system_test.py
@@ -346,6 +346,13 @@ def test_install_latest(self):
         spack_install_and_test('flexpart-ifs @meteoswiss-10')
 
 
+@pytest.mark.no_tsa  # No one uses spack for flexpart-cosmo on Tsa
+class FlexpartCosmoTest(unittest.TestCase):
+
+    def test_install(self):
+        spack_install_and_test('flexpart-cosmo')
+
+
 class GridToolsTest(unittest.TestCase):
 
     def test_install_version_1_1_3_gcc(self):