diff --git a/test/usecases/cvode/derivative.mod b/test/usecases/cvode/derivative.mod index 70aa20352..d3715352f 100644 --- a/test/usecases/cvode/derivative.mod +++ b/test/usecases/cvode/derivative.mod @@ -12,20 +12,14 @@ PARAMETER { v5 = 0.3 r = 3 k = 0.2 - nmodl_alpha = 1.2 - nmodl_beta = 4.5 - nmodl_gamma = 2.4 - nmodl_delta = 7.5 } -STATE {var1 var2 var3 var4 var5} +STATE {var1 var2 var3} INITIAL { var1 = v1 var2 = v2 var3 = v3 - var4 = v4 - var5 = v5 } BREAKPOINT { @@ -40,7 +34,4 @@ DERIVATIVE equation { var2' = -var2 * a : logistic ODE var3' = r * var3 * (1 - var3 / k) - : system of 2 ODEs (predator-prey model) - var4' = nmodl_alpha * var4 - nmodl_beta * var4 * var5 - var5' = nmodl_delta * var4 * var5 - nmodl_gamma * var5 } diff --git a/test/usecases/cvode/test_cvode.py b/test/usecases/cvode/test_cvode.py index 521b93f67..c5ae18cc3 100644 --- a/test/usecases/cvode/test_cvode.py +++ b/test/usecases/cvode/test_cvode.py @@ -50,8 +50,3 @@ def simulate(rtol): if __name__ == "__main__": t, *x = simulate(rtol=1e-5) - # import matplotlib.pyplot as plt - # fig, ax = plt.subplots(nrows=len(x)) - # for a, val in zip(ax, x): - # a.plot(t, val, ls="", marker="x", markersize=0.1) - # plt.show()