diff --git a/.doctrees/environment.pickle b/.doctrees/environment.pickle index d6331ccfb..74054f1cc 100644 Binary files a/.doctrees/environment.pickle and b/.doctrees/environment.pickle differ diff --git a/.doctrees/nbsphinx/notebooks/nmodl-kinetic-schemes.ipynb b/.doctrees/nbsphinx/notebooks/nmodl-kinetic-schemes.ipynb index 0de187861..7f64f2aac 100644 --- a/.doctrees/nbsphinx/notebooks/nmodl-kinetic-schemes.ipynb +++ b/.doctrees/nbsphinx/notebooks/nmodl-kinetic-schemes.ipynb @@ -152,10 +152,10 @@ "execution_count": 1, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:00.097751Z", - "iopub.status.busy": "2024-07-22T11:45:00.097237Z", - "iopub.status.idle": "2024-07-22T11:45:00.886487Z", - "shell.execute_reply": "2024-07-22T11:45:00.885683Z" + "iopub.execute_input": "2024-07-22T13:04:22.108885Z", + "iopub.status.busy": "2024-07-22T13:04:22.108690Z", + "iopub.status.idle": "2024-07-22T13:04:22.902405Z", + "shell.execute_reply": "2024-07-22T13:04:22.901552Z" } }, "outputs": [], @@ -169,10 +169,10 @@ "execution_count": 2, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:00.889734Z", - "iopub.status.busy": "2024-07-22T11:45:00.889333Z", - "iopub.status.idle": "2024-07-22T11:45:00.918735Z", - "shell.execute_reply": "2024-07-22T11:45:00.918000Z" + "iopub.execute_input": "2024-07-22T13:04:22.905748Z", + "iopub.status.busy": "2024-07-22T13:04:22.905371Z", + "iopub.status.idle": "2024-07-22T13:04:22.935598Z", + "shell.execute_reply": "2024-07-22T13:04:22.934826Z" } }, "outputs": [], @@ -277,10 +277,10 @@ "execution_count": 3, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:00.921787Z", - "iopub.status.busy": "2024-07-22T11:45:00.921232Z", - "iopub.status.idle": "2024-07-22T11:45:00.925974Z", - "shell.execute_reply": "2024-07-22T11:45:00.925315Z" + "iopub.execute_input": "2024-07-22T13:04:22.938718Z", + "iopub.status.busy": "2024-07-22T13:04:22.938499Z", + "iopub.status.idle": "2024-07-22T13:04:22.943306Z", + "shell.execute_reply": "2024-07-22T13:04:22.942605Z" } }, "outputs": [ @@ -323,10 +323,10 @@ "execution_count": 4, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:00.955789Z", - "iopub.status.busy": "2024-07-22T11:45:00.955376Z", - "iopub.status.idle": "2024-07-22T11:45:00.959360Z", - "shell.execute_reply": "2024-07-22T11:45:00.958711Z" + "iopub.execute_input": "2024-07-22T13:04:22.974807Z", + "iopub.status.busy": "2024-07-22T13:04:22.974238Z", + "iopub.status.idle": "2024-07-22T13:04:22.978197Z", + "shell.execute_reply": "2024-07-22T13:04:22.977505Z" } }, "outputs": [ @@ -367,10 +367,10 @@ "execution_count": 5, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:00.961902Z", - "iopub.status.busy": "2024-07-22T11:45:00.961503Z", - "iopub.status.idle": "2024-07-22T11:45:00.965393Z", - "shell.execute_reply": "2024-07-22T11:45:00.964641Z" + "iopub.execute_input": "2024-07-22T13:04:22.980909Z", + "iopub.status.busy": "2024-07-22T13:04:22.980509Z", + "iopub.status.idle": "2024-07-22T13:04:22.984320Z", + "shell.execute_reply": "2024-07-22T13:04:22.983656Z" }, "scrolled": true }, @@ -412,10 +412,10 @@ "execution_count": 6, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:00.967706Z", - "iopub.status.busy": "2024-07-22T11:45:00.967506Z", - "iopub.status.idle": "2024-07-22T11:45:00.971499Z", - "shell.execute_reply": "2024-07-22T11:45:00.970849Z" + "iopub.execute_input": "2024-07-22T13:04:22.986965Z", + "iopub.status.busy": "2024-07-22T13:04:22.986607Z", + "iopub.status.idle": "2024-07-22T13:04:22.990655Z", + "shell.execute_reply": "2024-07-22T13:04:22.989992Z" }, "scrolled": true }, @@ -459,10 +459,10 @@ "execution_count": 7, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:00.973817Z", - "iopub.status.busy": "2024-07-22T11:45:00.973619Z", - "iopub.status.idle": "2024-07-22T11:45:00.978532Z", - "shell.execute_reply": "2024-07-22T11:45:00.977870Z" + "iopub.execute_input": "2024-07-22T13:04:22.993209Z", + "iopub.status.busy": "2024-07-22T13:04:22.992734Z", + "iopub.status.idle": "2024-07-22T13:04:22.997108Z", + "shell.execute_reply": "2024-07-22T13:04:22.996432Z" } }, "outputs": [ diff --git a/.doctrees/nbsphinx/notebooks/nmodl-python-tutorial.ipynb b/.doctrees/nbsphinx/notebooks/nmodl-python-tutorial.ipynb index 5c2aa4cbf..bf1de632f 100644 --- a/.doctrees/nbsphinx/notebooks/nmodl-python-tutorial.ipynb +++ b/.doctrees/nbsphinx/notebooks/nmodl-python-tutorial.ipynb @@ -30,10 +30,10 @@ "execution_count": 1, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:06.128241Z", - "iopub.status.busy": "2024-07-22T11:45:06.128042Z", - "iopub.status.idle": "2024-07-22T11:45:06.919410Z", - "shell.execute_reply": "2024-07-22T11:45:06.918512Z" + "iopub.execute_input": "2024-07-22T13:04:28.425741Z", + "iopub.status.busy": "2024-07-22T13:04:28.425169Z", + "iopub.status.idle": "2024-07-22T13:04:29.228272Z", + "shell.execute_reply": "2024-07-22T13:04:29.227505Z" } }, "outputs": [], @@ -63,10 +63,10 @@ "execution_count": 2, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:06.922865Z", - "iopub.status.busy": "2024-07-22T11:45:06.922393Z", - "iopub.status.idle": "2024-07-22T11:45:06.950828Z", - "shell.execute_reply": "2024-07-22T11:45:06.950048Z" + "iopub.execute_input": "2024-07-22T13:04:29.231747Z", + "iopub.status.busy": "2024-07-22T13:04:29.231280Z", + "iopub.status.idle": "2024-07-22T13:04:29.259134Z", + "shell.execute_reply": "2024-07-22T13:04:29.258470Z" } }, "outputs": [], @@ -86,10 +86,10 @@ "execution_count": 3, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:06.954165Z", - "iopub.status.busy": "2024-07-22T11:45:06.953747Z", - "iopub.status.idle": "2024-07-22T11:45:06.957414Z", - "shell.execute_reply": "2024-07-22T11:45:06.956772Z" + "iopub.execute_input": "2024-07-22T13:04:29.262280Z", + "iopub.status.busy": "2024-07-22T13:04:29.261942Z", + "iopub.status.idle": "2024-07-22T13:04:29.265727Z", + "shell.execute_reply": "2024-07-22T13:04:29.265178Z" } }, "outputs": [], @@ -152,10 +152,10 @@ "execution_count": 4, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:06.959883Z", - "iopub.status.busy": "2024-07-22T11:45:06.959509Z", - "iopub.status.idle": "2024-07-22T11:45:06.963331Z", - "shell.execute_reply": "2024-07-22T11:45:06.962692Z" + "iopub.execute_input": "2024-07-22T13:04:29.268190Z", + "iopub.status.busy": "2024-07-22T13:04:29.267833Z", + "iopub.status.idle": "2024-07-22T13:04:29.271633Z", + "shell.execute_reply": "2024-07-22T13:04:29.270983Z" } }, "outputs": [], @@ -183,10 +183,10 @@ "execution_count": 5, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:06.965999Z", - "iopub.status.busy": "2024-07-22T11:45:06.965525Z", - "iopub.status.idle": "2024-07-22T11:45:06.969274Z", - "shell.execute_reply": "2024-07-22T11:45:06.968628Z" + "iopub.execute_input": "2024-07-22T13:04:29.274034Z", + "iopub.status.busy": "2024-07-22T13:04:29.273838Z", + "iopub.status.idle": "2024-07-22T13:04:29.277798Z", + "shell.execute_reply": "2024-07-22T13:04:29.277099Z" } }, "outputs": [ @@ -235,10 +235,10 @@ "execution_count": 6, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:06.971929Z", - "iopub.status.busy": "2024-07-22T11:45:06.971441Z", - "iopub.status.idle": "2024-07-22T11:45:06.975570Z", - "shell.execute_reply": "2024-07-22T11:45:06.974941Z" + "iopub.execute_input": "2024-07-22T13:04:29.280295Z", + "iopub.status.busy": "2024-07-22T13:04:29.279915Z", + "iopub.status.idle": "2024-07-22T13:04:29.284172Z", + "shell.execute_reply": "2024-07-22T13:04:29.283654Z" } }, "outputs": [], @@ -260,10 +260,10 @@ "execution_count": 7, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:06.978249Z", - "iopub.status.busy": "2024-07-22T11:45:06.977893Z", - "iopub.status.idle": "2024-07-22T11:45:06.981512Z", - "shell.execute_reply": "2024-07-22T11:45:06.980881Z" + "iopub.execute_input": "2024-07-22T13:04:29.286531Z", + "iopub.status.busy": "2024-07-22T13:04:29.286228Z", + "iopub.status.idle": "2024-07-22T13:04:29.289879Z", + "shell.execute_reply": "2024-07-22T13:04:29.289248Z" } }, "outputs": [ @@ -297,10 +297,10 @@ "execution_count": 8, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:06.983876Z", - "iopub.status.busy": "2024-07-22T11:45:06.983530Z", - "iopub.status.idle": "2024-07-22T11:45:06.990778Z", - "shell.execute_reply": "2024-07-22T11:45:06.990089Z" + "iopub.execute_input": "2024-07-22T13:04:29.292240Z", + "iopub.status.busy": "2024-07-22T13:04:29.291890Z", + "iopub.status.idle": "2024-07-22T13:04:29.300036Z", + "shell.execute_reply": "2024-07-22T13:04:29.299411Z" } }, "outputs": [ @@ -365,10 +365,10 @@ "execution_count": 9, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:06.993238Z", - "iopub.status.busy": "2024-07-22T11:45:06.993033Z", - "iopub.status.idle": "2024-07-22T11:45:06.997372Z", - "shell.execute_reply": "2024-07-22T11:45:06.996699Z" + "iopub.execute_input": "2024-07-22T13:04:29.302420Z", + "iopub.status.busy": "2024-07-22T13:04:29.302080Z", + "iopub.status.idle": "2024-07-22T13:04:29.306455Z", + "shell.execute_reply": "2024-07-22T13:04:29.305799Z" } }, "outputs": [ @@ -416,10 +416,10 @@ "execution_count": 10, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:06.999810Z", - "iopub.status.busy": "2024-07-22T11:45:06.999605Z", - "iopub.status.idle": "2024-07-22T11:45:07.003007Z", - "shell.execute_reply": "2024-07-22T11:45:07.002358Z" + "iopub.execute_input": "2024-07-22T13:04:29.308867Z", + "iopub.status.busy": "2024-07-22T13:04:29.308515Z", + "iopub.status.idle": "2024-07-22T13:04:29.311806Z", + "shell.execute_reply": "2024-07-22T13:04:29.311286Z" } }, "outputs": [], @@ -441,10 +441,10 @@ "execution_count": 11, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:07.005486Z", - "iopub.status.busy": "2024-07-22T11:45:07.005022Z", - "iopub.status.idle": "2024-07-22T11:45:07.008872Z", - "shell.execute_reply": "2024-07-22T11:45:07.008233Z" + "iopub.execute_input": "2024-07-22T13:04:29.314275Z", + "iopub.status.busy": "2024-07-22T13:04:29.313907Z", + "iopub.status.idle": "2024-07-22T13:04:29.317599Z", + "shell.execute_reply": "2024-07-22T13:04:29.316951Z" } }, "outputs": [ @@ -510,10 +510,10 @@ "execution_count": 12, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:07.011514Z", - "iopub.status.busy": "2024-07-22T11:45:07.011012Z", - "iopub.status.idle": "2024-07-22T11:45:07.014582Z", - "shell.execute_reply": "2024-07-22T11:45:07.013946Z" + "iopub.execute_input": "2024-07-22T13:04:29.320099Z", + "iopub.status.busy": "2024-07-22T13:04:29.319780Z", + "iopub.status.idle": "2024-07-22T13:04:29.323106Z", + "shell.execute_reply": "2024-07-22T13:04:29.322457Z" } }, "outputs": [ @@ -548,10 +548,10 @@ "execution_count": 13, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:07.017050Z", - "iopub.status.busy": "2024-07-22T11:45:07.016692Z", - "iopub.status.idle": "2024-07-22T11:45:07.020210Z", - "shell.execute_reply": "2024-07-22T11:45:07.019571Z" + "iopub.execute_input": "2024-07-22T13:04:29.325541Z", + "iopub.status.busy": "2024-07-22T13:04:29.325239Z", + "iopub.status.idle": "2024-07-22T13:04:29.328700Z", + "shell.execute_reply": "2024-07-22T13:04:29.328020Z" } }, "outputs": [ @@ -584,10 +584,10 @@ "execution_count": 14, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:07.022696Z", - "iopub.status.busy": "2024-07-22T11:45:07.022319Z", - "iopub.status.idle": "2024-07-22T11:45:07.025968Z", - "shell.execute_reply": "2024-07-22T11:45:07.025330Z" + "iopub.execute_input": "2024-07-22T13:04:29.331200Z", + "iopub.status.busy": "2024-07-22T13:04:29.330778Z", + "iopub.status.idle": "2024-07-22T13:04:29.334744Z", + "shell.execute_reply": "2024-07-22T13:04:29.334078Z" } }, "outputs": [ @@ -622,10 +622,10 @@ "execution_count": 15, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:07.028505Z", - "iopub.status.busy": "2024-07-22T11:45:07.027992Z", - "iopub.status.idle": "2024-07-22T11:45:07.032188Z", - "shell.execute_reply": "2024-07-22T11:45:07.031542Z" + "iopub.execute_input": "2024-07-22T13:04:29.337202Z", + "iopub.status.busy": "2024-07-22T13:04:29.336838Z", + "iopub.status.idle": "2024-07-22T13:04:29.341166Z", + "shell.execute_reply": "2024-07-22T13:04:29.340514Z" } }, "outputs": [ @@ -669,10 +669,10 @@ "execution_count": 16, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:07.034688Z", - "iopub.status.busy": "2024-07-22T11:45:07.034302Z", - "iopub.status.idle": "2024-07-22T11:45:07.040049Z", - "shell.execute_reply": "2024-07-22T11:45:07.039386Z" + "iopub.execute_input": "2024-07-22T13:04:29.343711Z", + "iopub.status.busy": "2024-07-22T13:04:29.343357Z", + "iopub.status.idle": "2024-07-22T13:04:29.348857Z", + "shell.execute_reply": "2024-07-22T13:04:29.348179Z" } }, "outputs": [ @@ -733,10 +733,10 @@ "execution_count": 17, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:07.043145Z", - "iopub.status.busy": "2024-07-22T11:45:07.042041Z", - "iopub.status.idle": "2024-07-22T11:45:07.046342Z", - "shell.execute_reply": "2024-07-22T11:45:07.045640Z" + "iopub.execute_input": "2024-07-22T13:04:29.351461Z", + "iopub.status.busy": "2024-07-22T13:04:29.350966Z", + "iopub.status.idle": "2024-07-22T13:04:29.354661Z", + "shell.execute_reply": "2024-07-22T13:04:29.354118Z" } }, "outputs": [], @@ -761,10 +761,10 @@ "execution_count": 18, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:07.048769Z", - "iopub.status.busy": "2024-07-22T11:45:07.048551Z", - "iopub.status.idle": "2024-07-22T11:45:07.058671Z", - "shell.execute_reply": "2024-07-22T11:45:07.058093Z" + "iopub.execute_input": "2024-07-22T13:04:29.357013Z", + "iopub.status.busy": "2024-07-22T13:04:29.356637Z", + "iopub.status.idle": "2024-07-22T13:04:29.366895Z", + "shell.execute_reply": "2024-07-22T13:04:29.366338Z" } }, "outputs": [], @@ -857,10 +857,10 @@ "execution_count": 19, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:07.060991Z", - "iopub.status.busy": "2024-07-22T11:45:07.060790Z", - "iopub.status.idle": "2024-07-22T11:45:07.064322Z", - "shell.execute_reply": "2024-07-22T11:45:07.063648Z" + "iopub.execute_input": "2024-07-22T13:04:29.369337Z", + "iopub.status.busy": "2024-07-22T13:04:29.368951Z", + "iopub.status.idle": "2024-07-22T13:04:29.372785Z", + "shell.execute_reply": "2024-07-22T13:04:29.372094Z" } }, "outputs": [ @@ -897,10 +897,10 @@ "execution_count": 20, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:07.066916Z", - "iopub.status.busy": "2024-07-22T11:45:07.066545Z", - "iopub.status.idle": "2024-07-22T11:45:07.072182Z", - "shell.execute_reply": "2024-07-22T11:45:07.071516Z" + "iopub.execute_input": "2024-07-22T13:04:29.375356Z", + "iopub.status.busy": "2024-07-22T13:04:29.374979Z", + "iopub.status.idle": "2024-07-22T13:04:29.380426Z", + "shell.execute_reply": "2024-07-22T13:04:29.379739Z" } }, "outputs": [ diff --git a/.doctrees/nbsphinx/notebooks/nmodl-sympy-conductance.ipynb b/.doctrees/nbsphinx/notebooks/nmodl-sympy-conductance.ipynb index 890a8e0af..55cb06bab 100644 --- a/.doctrees/nbsphinx/notebooks/nmodl-sympy-conductance.ipynb +++ b/.doctrees/nbsphinx/notebooks/nmodl-sympy-conductance.ipynb @@ -86,10 +86,10 @@ "execution_count": 1, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:09.598094Z", - "iopub.status.busy": "2024-07-22T11:45:09.597700Z", - "iopub.status.idle": "2024-07-22T11:45:10.403271Z", - "shell.execute_reply": "2024-07-22T11:45:10.402489Z" + "iopub.execute_input": "2024-07-22T13:04:31.902344Z", + "iopub.status.busy": "2024-07-22T13:04:31.902143Z", + "iopub.status.idle": "2024-07-22T13:04:32.697309Z", + "shell.execute_reply": "2024-07-22T13:04:32.696413Z" } }, "outputs": [], @@ -103,10 +103,10 @@ "execution_count": 2, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:10.406406Z", - "iopub.status.busy": "2024-07-22T11:45:10.406188Z", - "iopub.status.idle": "2024-07-22T11:45:10.435755Z", - "shell.execute_reply": "2024-07-22T11:45:10.435119Z" + "iopub.execute_input": "2024-07-22T13:04:32.700780Z", + "iopub.status.busy": "2024-07-22T13:04:32.700346Z", + "iopub.status.idle": "2024-07-22T13:04:32.730107Z", + "shell.execute_reply": "2024-07-22T13:04:32.729490Z" } }, "outputs": [], @@ -149,10 +149,10 @@ "execution_count": 3, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:10.438723Z", - "iopub.status.busy": "2024-07-22T11:45:10.438509Z", - "iopub.status.idle": "2024-07-22T11:45:10.717590Z", - "shell.execute_reply": "2024-07-22T11:45:10.716819Z" + "iopub.execute_input": "2024-07-22T13:04:32.732820Z", + "iopub.status.busy": "2024-07-22T13:04:32.732479Z", + "iopub.status.idle": "2024-07-22T13:04:33.003499Z", + "shell.execute_reply": "2024-07-22T13:04:33.002789Z" } }, "outputs": [ @@ -196,10 +196,10 @@ "execution_count": 4, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:10.720652Z", - "iopub.status.busy": "2024-07-22T11:45:10.719979Z", - "iopub.status.idle": "2024-07-22T11:45:10.852920Z", - "shell.execute_reply": "2024-07-22T11:45:10.852133Z" + "iopub.execute_input": "2024-07-22T13:04:33.006538Z", + "iopub.status.busy": "2024-07-22T13:04:33.005937Z", + "iopub.status.idle": "2024-07-22T13:04:33.137017Z", + "shell.execute_reply": "2024-07-22T13:04:33.136320Z" } }, "outputs": [ @@ -243,10 +243,10 @@ "execution_count": 5, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:10.855698Z", - "iopub.status.busy": "2024-07-22T11:45:10.855465Z", - "iopub.status.idle": "2024-07-22T11:45:10.864204Z", - "shell.execute_reply": "2024-07-22T11:45:10.863575Z" + "iopub.execute_input": "2024-07-22T13:04:33.139563Z", + "iopub.status.busy": "2024-07-22T13:04:33.139349Z", + "iopub.status.idle": "2024-07-22T13:04:33.147765Z", + "shell.execute_reply": "2024-07-22T13:04:33.147096Z" } }, "outputs": [ @@ -290,10 +290,10 @@ "execution_count": 6, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:10.866765Z", - "iopub.status.busy": "2024-07-22T11:45:10.866558Z", - "iopub.status.idle": "2024-07-22T11:45:10.885047Z", - "shell.execute_reply": "2024-07-22T11:45:10.884462Z" + "iopub.execute_input": "2024-07-22T13:04:33.150327Z", + "iopub.status.busy": "2024-07-22T13:04:33.149952Z", + "iopub.status.idle": "2024-07-22T13:04:33.167797Z", + "shell.execute_reply": "2024-07-22T13:04:33.167089Z" } }, "outputs": [ @@ -337,10 +337,10 @@ "execution_count": 7, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:10.887382Z", - "iopub.status.busy": "2024-07-22T11:45:10.887182Z", - "iopub.status.idle": "2024-07-22T11:45:11.006899Z", - "shell.execute_reply": "2024-07-22T11:45:11.006251Z" + "iopub.execute_input": "2024-07-22T13:04:33.170370Z", + "iopub.status.busy": "2024-07-22T13:04:33.169905Z", + "iopub.status.idle": "2024-07-22T13:04:33.287908Z", + "shell.execute_reply": "2024-07-22T13:04:33.287366Z" } }, "outputs": [ @@ -400,10 +400,10 @@ "execution_count": 8, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:11.009447Z", - "iopub.status.busy": "2024-07-22T11:45:11.009221Z", - "iopub.status.idle": "2024-07-22T11:45:11.106520Z", - "shell.execute_reply": "2024-07-22T11:45:11.105824Z" + "iopub.execute_input": "2024-07-22T13:04:33.290506Z", + "iopub.status.busy": "2024-07-22T13:04:33.290139Z", + "iopub.status.idle": "2024-07-22T13:04:33.384418Z", + "shell.execute_reply": "2024-07-22T13:04:33.383751Z" } }, "outputs": [ @@ -456,10 +456,10 @@ "execution_count": 9, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:11.109202Z", - "iopub.status.busy": "2024-07-22T11:45:11.108787Z", - "iopub.status.idle": "2024-07-22T11:45:11.185143Z", - "shell.execute_reply": "2024-07-22T11:45:11.184507Z" + "iopub.execute_input": "2024-07-22T13:04:33.387092Z", + "iopub.status.busy": "2024-07-22T13:04:33.386658Z", + "iopub.status.idle": "2024-07-22T13:04:33.460293Z", + "shell.execute_reply": "2024-07-22T13:04:33.459714Z" } }, "outputs": [ diff --git a/.doctrees/nbsphinx/notebooks/nmodl-sympy-solver-cnexp.ipynb b/.doctrees/nbsphinx/notebooks/nmodl-sympy-solver-cnexp.ipynb index 66aee0063..723ce9622 100644 --- a/.doctrees/nbsphinx/notebooks/nmodl-sympy-solver-cnexp.ipynb +++ b/.doctrees/nbsphinx/notebooks/nmodl-sympy-solver-cnexp.ipynb @@ -62,10 +62,10 @@ "execution_count": 1, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:13.129536Z", - "iopub.status.busy": "2024-07-22T11:45:13.129349Z", - "iopub.status.idle": "2024-07-22T11:45:13.929979Z", - "shell.execute_reply": "2024-07-22T11:45:13.929057Z" + "iopub.execute_input": "2024-07-22T13:04:35.369635Z", + "iopub.status.busy": "2024-07-22T13:04:35.369444Z", + "iopub.status.idle": "2024-07-22T13:04:36.152006Z", + "shell.execute_reply": "2024-07-22T13:04:36.151177Z" } }, "outputs": [], @@ -79,10 +79,10 @@ "execution_count": 2, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:13.933206Z", - "iopub.status.busy": "2024-07-22T11:45:13.932955Z", - "iopub.status.idle": "2024-07-22T11:45:13.963499Z", - "shell.execute_reply": "2024-07-22T11:45:13.962777Z" + "iopub.execute_input": "2024-07-22T13:04:36.155183Z", + "iopub.status.busy": "2024-07-22T13:04:36.154904Z", + "iopub.status.idle": "2024-07-22T13:04:36.185484Z", + "shell.execute_reply": "2024-07-22T13:04:36.184862Z" } }, "outputs": [], @@ -123,10 +123,10 @@ "execution_count": 3, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:13.966409Z", - "iopub.status.busy": "2024-07-22T11:45:13.966195Z", - "iopub.status.idle": "2024-07-22T11:45:14.401434Z", - "shell.execute_reply": "2024-07-22T11:45:14.400717Z" + "iopub.execute_input": "2024-07-22T13:04:36.188194Z", + "iopub.status.busy": "2024-07-22T13:04:36.187754Z", + "iopub.status.idle": "2024-07-22T13:04:36.604678Z", + "shell.execute_reply": "2024-07-22T13:04:36.603954Z" } }, "outputs": [ @@ -165,10 +165,10 @@ "execution_count": 4, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:14.404367Z", - "iopub.status.busy": "2024-07-22T11:45:14.403921Z", - "iopub.status.idle": "2024-07-22T11:45:14.516720Z", - "shell.execute_reply": "2024-07-22T11:45:14.516003Z" + "iopub.execute_input": "2024-07-22T13:04:36.607342Z", + "iopub.status.busy": "2024-07-22T13:04:36.607115Z", + "iopub.status.idle": "2024-07-22T13:04:36.717297Z", + "shell.execute_reply": "2024-07-22T13:04:36.716642Z" } }, "outputs": [ @@ -207,10 +207,10 @@ "execution_count": 5, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:14.519511Z", - "iopub.status.busy": "2024-07-22T11:45:14.519066Z", - "iopub.status.idle": "2024-07-22T11:45:14.724202Z", - "shell.execute_reply": "2024-07-22T11:45:14.723319Z" + "iopub.execute_input": "2024-07-22T13:04:36.719635Z", + "iopub.status.busy": "2024-07-22T13:04:36.719440Z", + "iopub.status.idle": "2024-07-22T13:04:36.914182Z", + "shell.execute_reply": "2024-07-22T13:04:36.913529Z" } }, "outputs": [ @@ -255,10 +255,10 @@ "execution_count": 6, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:14.727748Z", - "iopub.status.busy": "2024-07-22T11:45:14.727135Z", - "iopub.status.idle": "2024-07-22T11:45:14.896251Z", - "shell.execute_reply": "2024-07-22T11:45:14.895586Z" + "iopub.execute_input": "2024-07-22T13:04:36.916754Z", + "iopub.status.busy": "2024-07-22T13:04:36.916553Z", + "iopub.status.idle": "2024-07-22T13:04:37.076053Z", + "shell.execute_reply": "2024-07-22T13:04:37.075450Z" } }, "outputs": [ @@ -303,10 +303,10 @@ "execution_count": 7, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:14.899185Z", - "iopub.status.busy": "2024-07-22T11:45:14.898663Z", - "iopub.status.idle": "2024-07-22T11:45:16.664982Z", - "shell.execute_reply": "2024-07-22T11:45:16.664198Z" + "iopub.execute_input": "2024-07-22T13:04:37.078555Z", + "iopub.status.busy": "2024-07-22T13:04:37.078165Z", + "iopub.status.idle": "2024-07-22T13:04:38.840530Z", + "shell.execute_reply": "2024-07-22T13:04:38.839820Z" } }, "outputs": [ @@ -351,10 +351,10 @@ "execution_count": 8, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:16.667796Z", - "iopub.status.busy": "2024-07-22T11:45:16.667275Z", - "iopub.status.idle": "2024-07-22T11:45:18.925585Z", - "shell.execute_reply": "2024-07-22T11:45:18.924843Z" + "iopub.execute_input": "2024-07-22T13:04:38.843608Z", + "iopub.status.busy": "2024-07-22T13:04:38.843174Z", + "iopub.status.idle": "2024-07-22T13:04:41.064183Z", + "shell.execute_reply": "2024-07-22T13:04:41.063534Z" } }, "outputs": [ diff --git a/.doctrees/nbsphinx/notebooks/nmodl-sympy-solver-derivimplicit.ipynb b/.doctrees/nbsphinx/notebooks/nmodl-sympy-solver-derivimplicit.ipynb index 51db92862..b6fdfdd55 100644 --- a/.doctrees/nbsphinx/notebooks/nmodl-sympy-solver-derivimplicit.ipynb +++ b/.doctrees/nbsphinx/notebooks/nmodl-sympy-solver-derivimplicit.ipynb @@ -39,10 +39,10 @@ "execution_count": 1, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:20.626291Z", - "iopub.status.busy": "2024-07-22T11:45:20.625722Z", - "iopub.status.idle": "2024-07-22T11:45:21.418798Z", - "shell.execute_reply": "2024-07-22T11:45:21.417880Z" + "iopub.execute_input": "2024-07-22T13:04:42.687836Z", + "iopub.status.busy": "2024-07-22T13:04:42.687635Z", + "iopub.status.idle": "2024-07-22T13:04:43.527743Z", + "shell.execute_reply": "2024-07-22T13:04:43.526839Z" } }, "outputs": [], @@ -56,10 +56,10 @@ "execution_count": 2, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:21.422087Z", - "iopub.status.busy": "2024-07-22T11:45:21.421846Z", - "iopub.status.idle": "2024-07-22T11:45:21.452159Z", - "shell.execute_reply": "2024-07-22T11:45:21.451390Z" + "iopub.execute_input": "2024-07-22T13:04:43.531050Z", + "iopub.status.busy": "2024-07-22T13:04:43.530820Z", + "iopub.status.idle": "2024-07-22T13:04:43.561147Z", + "shell.execute_reply": "2024-07-22T13:04:43.560398Z" } }, "outputs": [], @@ -100,10 +100,10 @@ "execution_count": 3, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:21.454978Z", - "iopub.status.busy": "2024-07-22T11:45:21.454766Z", - "iopub.status.idle": "2024-07-22T11:45:21.924879Z", - "shell.execute_reply": "2024-07-22T11:45:21.924097Z" + "iopub.execute_input": "2024-07-22T13:04:43.564166Z", + "iopub.status.busy": "2024-07-22T13:04:43.563724Z", + "iopub.status.idle": "2024-07-22T13:04:44.025029Z", + "shell.execute_reply": "2024-07-22T13:04:44.024306Z" } }, "outputs": [ @@ -165,10 +165,10 @@ "execution_count": 4, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:21.927713Z", - "iopub.status.busy": "2024-07-22T11:45:21.927235Z", - "iopub.status.idle": "2024-07-22T11:45:22.144472Z", - "shell.execute_reply": "2024-07-22T11:45:22.143800Z" + "iopub.execute_input": "2024-07-22T13:04:44.027916Z", + "iopub.status.busy": "2024-07-22T13:04:44.027488Z", + "iopub.status.idle": "2024-07-22T13:04:44.244322Z", + "shell.execute_reply": "2024-07-22T13:04:44.243566Z" } }, "outputs": [ diff --git a/.doctrees/nbsphinx/notebooks/nmodl-sympy-solver-sparse.ipynb b/.doctrees/nbsphinx/notebooks/nmodl-sympy-solver-sparse.ipynb index 8504b6879..6c65beda9 100644 --- a/.doctrees/nbsphinx/notebooks/nmodl-sympy-solver-sparse.ipynb +++ b/.doctrees/nbsphinx/notebooks/nmodl-sympy-solver-sparse.ipynb @@ -39,10 +39,10 @@ "execution_count": 1, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:23.510711Z", - "iopub.status.busy": "2024-07-22T11:45:23.510491Z", - "iopub.status.idle": "2024-07-22T11:45:24.309000Z", - "shell.execute_reply": "2024-07-22T11:45:24.308090Z" + "iopub.execute_input": "2024-07-22T13:04:45.777038Z", + "iopub.status.busy": "2024-07-22T13:04:45.776842Z", + "iopub.status.idle": "2024-07-22T13:04:46.572038Z", + "shell.execute_reply": "2024-07-22T13:04:46.571159Z" } }, "outputs": [], @@ -56,10 +56,10 @@ "execution_count": 2, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:24.312298Z", - "iopub.status.busy": "2024-07-22T11:45:24.312064Z", - "iopub.status.idle": "2024-07-22T11:45:24.342492Z", - "shell.execute_reply": "2024-07-22T11:45:24.341730Z" + "iopub.execute_input": "2024-07-22T13:04:46.575306Z", + "iopub.status.busy": "2024-07-22T13:04:46.575076Z", + "iopub.status.idle": "2024-07-22T13:04:46.605858Z", + "shell.execute_reply": "2024-07-22T13:04:46.605176Z" } }, "outputs": [], @@ -100,10 +100,10 @@ "execution_count": 3, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:24.345756Z", - "iopub.status.busy": "2024-07-22T11:45:24.345340Z", - "iopub.status.idle": "2024-07-22T11:45:24.822035Z", - "shell.execute_reply": "2024-07-22T11:45:24.821277Z" + "iopub.execute_input": "2024-07-22T13:04:46.609041Z", + "iopub.status.busy": "2024-07-22T13:04:46.608767Z", + "iopub.status.idle": "2024-07-22T13:04:47.082376Z", + "shell.execute_reply": "2024-07-22T13:04:47.081663Z" } }, "outputs": [ @@ -165,10 +165,10 @@ "execution_count": 4, "metadata": { "execution": { - "iopub.execute_input": "2024-07-22T11:45:24.825040Z", - "iopub.status.busy": "2024-07-22T11:45:24.824551Z", - "iopub.status.idle": "2024-07-22T11:45:25.045497Z", - "shell.execute_reply": "2024-07-22T11:45:25.044810Z" + "iopub.execute_input": "2024-07-22T13:04:47.085358Z", + "iopub.status.busy": "2024-07-22T13:04:47.084897Z", + "iopub.status.idle": "2024-07-22T13:04:47.301230Z", + "shell.execute_reply": "2024-07-22T13:04:47.300513Z" } }, "outputs": [ diff --git a/doxygen/classnmodl_1_1codegen_1_1_codegen_coreneuron_cpp_visitor.html b/doxygen/classnmodl_1_1codegen_1_1_codegen_coreneuron_cpp_visitor.html index 1473c5c57..bcbababfb 100644 --- a/doxygen/classnmodl_1_1codegen_1_1_codegen_coreneuron_cpp_visitor.html +++ b/doxygen/classnmodl_1_1codegen_1_1_codegen_coreneuron_cpp_visitor.html @@ -1300,7 +1300,7 @@
Definition at line 537 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 523 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -1332,7 +1332,7 @@Definition at line 523 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 509 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -1390,7 +1390,7 @@Definition at line 692 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 678 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -1457,7 +1457,7 @@Definition at line 255 of file codegen_cpp_visitor.hpp.
@@ -1493,7 +1493,7 @@Definition at line 283 of file codegen_cpp_visitor.hpp.
@@ -1525,7 +1525,7 @@Definition at line 573 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 559 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -1564,7 +1564,7 @@Definition at line 578 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 564 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -1615,7 +1615,7 @@Definition at line 869 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 855 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -1646,7 +1646,7 @@Definition at line 1091 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 1077 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -1683,7 +1683,7 @@Definition at line 1698 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 1684 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -1733,7 +1733,7 @@Definition at line 923 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 909 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -1783,7 +1783,7 @@Definition at line 913 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 899 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -1841,7 +1841,7 @@Definition at line 887 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 873 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -1873,7 +1873,7 @@Definition at line 548 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 534 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -1906,7 +1906,7 @@Definition at line 556 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 542 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -1944,7 +1944,7 @@true
if it is constantThis can be override in the backend. For example, parameters can be constant except in INITIAL block where they are set to 0. As initial block is/can be executed on c++/cpu backend, gpu backend can mark the parameter as constant.
-Definition at line 132 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 118 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -1974,7 +1974,7 @@Definition at line 2449 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 2435 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2005,7 +2005,7 @@Definition at line 261 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 247 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2036,7 +2036,7 @@Definition at line 596 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 582 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2068,7 +2068,7 @@Definition at line 608 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 594 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2128,7 +2128,7 @@Definition at line 328 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 314 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2206,7 +2206,7 @@Definition at line 80 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 73 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2237,7 +2237,7 @@Definition at line 350 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 336 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2269,7 +2269,7 @@Definition at line 303 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 289 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2300,7 +2300,7 @@Definition at line 323 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 309 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2330,7 +2330,7 @@Definition at line 299 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2360,7 +2360,7 @@Definition at line 304 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2411,7 +2411,7 @@Definition at line 1999 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2467,7 +2467,7 @@Definition at line 238 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 224 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2496,7 +2496,7 @@Definition at line 392 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2527,7 +2527,7 @@Definition at line 3094 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 3080 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2556,7 +2556,7 @@Definition at line 3010 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2587,7 +2587,7 @@Definition at line 3063 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 3049 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2616,7 +2616,7 @@Definition at line 993 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2654,7 +2654,7 @@Definition at line 3035 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 3021 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2685,7 +2685,7 @@Definition at line 157 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 143 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2723,7 +2723,7 @@Need to add instance into instance struct? data used here is wrong in AoS because as in original implementation, data is not incremented every iteration for AoS. May be better to derive actual variable names? [resolved now?] slist needs to added as local variable
-Definition at line 2660 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 2646 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2754,7 +2754,7 @@Definition at line 162 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 148 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2785,7 +2785,7 @@Definition at line 187 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 173 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2816,7 +2816,7 @@Definition at line 182 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 168 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2847,7 +2847,7 @@Definition at line 2939 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 2925 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2876,7 +2876,7 @@Definition at line 724 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2905,7 +2905,7 @@Definition at line 732 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2943,7 +2943,7 @@Definition at line 472 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 458 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -2999,7 +2999,7 @@Definition at line 430 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 416 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3037,7 +3037,7 @@Definition at line 453 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 439 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3068,7 +3068,7 @@Definition at line 387 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 373 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3104,7 +3104,7 @@Definition at line 478 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3135,7 +3135,7 @@Definition at line 3054 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 3040 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3164,7 +3164,7 @@Definition at line 2440 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3213,7 +3213,7 @@Definition at line 1887 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 1873 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3243,7 +3243,7 @@Definition at line 308 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 294 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3275,7 +3275,7 @@Definition at line 1672 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 1658 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3307,7 +3307,7 @@Definition at line 1266 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 1252 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3338,7 +3338,7 @@Definition at line 3005 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 2991 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3375,7 +3375,7 @@Definition at line 1823 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3531,7 +3531,7 @@Definition at line 1700 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3567,7 +3567,7 @@Definition at line 1636 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3596,7 +3596,7 @@Definition at line 1606 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3627,7 +3627,7 @@Definition at line 1667 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 1653 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3665,7 +3665,7 @@Definition at line 206 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 192 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3696,7 +3696,7 @@Definition at line 211 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 197 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3725,7 +3725,7 @@Definition at line 764 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3767,7 +3767,7 @@Definition at line 1119 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 1105 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3805,7 +3805,7 @@Definition at line 1578 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 1564 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3845,7 +3845,7 @@Definition at line 1373 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 1359 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3874,7 +3874,7 @@Definition at line 773 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3905,7 +3905,7 @@Definition at line 333 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 319 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3936,7 +3936,7 @@Definition at line 3012 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 2998 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3967,7 +3967,7 @@Definition at line 3018 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 3004 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -3998,7 +3998,7 @@Definition at line 798 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 784 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4029,7 +4029,7 @@Definition at line 804 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 790 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4067,7 +4067,7 @@Definition at line 2344 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 2330 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4096,7 +4096,7 @@Definition at line 2382 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4127,7 +4127,7 @@Definition at line 216 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 202 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4158,7 +4158,7 @@Definition at line 221 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 207 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4196,7 +4196,7 @@Definition at line 2317 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 2303 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4225,7 +4225,7 @@Definition at line 2605 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4254,7 +4254,7 @@Definition at line 753 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4290,7 +4290,7 @@Definition at line 2461 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4337,7 +4337,7 @@Definition at line 2220 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4366,7 +4366,7 @@Definition at line 2546 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4395,7 +4395,7 @@Definition at line 2449 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4424,7 +4424,7 @@Definition at line 2456 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4455,7 +4455,7 @@Definition at line 177 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 163 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4486,7 +4486,7 @@Definition at line 167 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 153 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4517,7 +4517,7 @@Definition at line 172 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 158 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4547,7 +4547,7 @@Definition at line 2519 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4579,7 +4579,7 @@Definition at line 2521 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 2507 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4611,7 +4611,7 @@Definition at line 2526 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 2512 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4649,7 +4649,7 @@Definition at line 2285 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 2271 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4680,7 +4680,7 @@Definition at line 2749 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 2735 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4711,7 +4711,7 @@Definition at line 2091 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 2077 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4742,7 +4742,7 @@Definition at line 2067 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 2053 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4773,7 +4773,7 @@Definition at line 2968 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 2954 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4812,7 +4812,7 @@Definition at line 2832 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 2818 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4850,7 +4850,7 @@Definition at line 2903 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 2889 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4881,7 +4881,7 @@Definition at line 287 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 273 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4912,7 +4912,7 @@Definition at line 274 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 260 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4944,7 +4944,7 @@Definition at line 2869 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 2855 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -4983,7 +4983,7 @@Definition at line 2814 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 2800 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -5014,7 +5014,7 @@Definition at line 2079 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 2065 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -5050,7 +5050,7 @@Definition at line 1924 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -5082,7 +5082,7 @@Definition at line 2759 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 2745 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -5111,7 +5111,7 @@Definition at line 740 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -5149,7 +5149,7 @@Definition at line 467 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 453 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -5180,7 +5180,7 @@Definition at line 266 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 252 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -5210,7 +5210,7 @@Definition at line 1040 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 1026 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -5239,7 +5239,7 @@Definition at line 2414 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -5268,7 +5268,7 @@Definition at line 1663 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -5299,7 +5299,7 @@Definition at line 996 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 982 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -5334,7 +5334,7 @@Definition at line 806 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -5363,7 +5363,7 @@Definition at line 1501 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -5392,7 +5392,7 @@Definition at line 349 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -5423,7 +5423,7 @@Definition at line 3042 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 3028 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -5455,7 +5455,7 @@Definition at line 2104 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 2090 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -5486,7 +5486,7 @@need to verify with neuron/coreneuron about rest.
-Definition at line 2152 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 2138 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -5527,7 +5527,7 @@Definition at line 646 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 632 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -5565,7 +5565,7 @@Often top level verbatim blocks use variables with old names. Here we process if we are processing verbatim block at global scope.
-Definition at line 96 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 82 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -5596,7 +5596,7 @@Definition at line 673 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 659 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -5635,7 +5635,7 @@if function is defined the same mod file then the arguments must contain mechanism instance as well.
-Definition at line 617 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 603 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -5698,7 +5698,7 @@Definition at line 3125 of file codegen_coreneuron_cpp_visitor.cpp.
+Definition at line 3111 of file codegen_coreneuron_cpp_visitor.cpp.
@@ -5730,7 +5730,7 @@