From 58be908468a594037851c588bd10f2dd36a88446 Mon Sep 17 00:00:00 2001 From: Mustafa Kerem Kurban Date: Thu, 3 Oct 2024 20:08:26 +0200 Subject: [PATCH] clean --- src/neuroagent/tools/bluenaas_tool.py | 16 +--------------- src/neuroagent/tools/get_me_model_tool.py | 5 ----- 2 files changed, 1 insertion(+), 20 deletions(-) diff --git a/src/neuroagent/tools/bluenaas_tool.py b/src/neuroagent/tools/bluenaas_tool.py index 7feff3e..ccedb20 100644 --- a/src/neuroagent/tools/bluenaas_tool.py +++ b/src/neuroagent/tools/bluenaas_tool.py @@ -12,12 +12,6 @@ logger = logging.getLogger(__name__) #TODO : since bluenaaas has multiple endpoints for synapse generation ,nexus query, simulation, how should we handle those? -# class SynapseSimulationConfig(BaseModel): -# id: str -# delay: int -# duration: int -# frequency: PositiveInt -# weightScalar: int class SimulationStimulusConfig(BaseModel): stimulusType: Literal["current_clamp", "voltage_clamp", "conductance"] @@ -40,9 +34,6 @@ class SimulationConditionsConfig(BaseModel): time_step: float # usually 0.025 ms seed: int # can be any nubmer -# class SimulationWithSynapseBody(BaseModel): -# directCurrentConfig: CurrentInjectionConfig -# synapseConfigs: list[SynapseSimulationConfig] class InputBlueNaaS(BaseModel): @@ -54,12 +45,7 @@ class InputBlueNaaS(BaseModel): " fetched using the 'get-me-model-tool'." ) ) - # synapses: list[SynapseSimulationConfig] = Field( - # description=( - # "List of synapse configurations. Each synapse configuration includes the" - # " synapse ID, delay, duration, frequency, and weight scalar." - # ) - # ) + currentInjection: CurrentInjectionConfig = Field( description=( "Configuration for current injection. Includes the target section to inject" diff --git a/src/neuroagent/tools/get_me_model_tool.py b/src/neuroagent/tools/get_me_model_tool.py index 7b267cf..f3c8498 100644 --- a/src/neuroagent/tools/get_me_model_tool.py +++ b/src/neuroagent/tools/get_me_model_tool.py @@ -14,11 +14,6 @@ logger = logging.getLogger(__name__) -# settings = Settings() -# langsmith_api_key = settings.langsmith.api_key.get_secret_value() -# langsmith_project = settings.langsmith.project -# langsmith_endpoint = settings.langsmith.endpoint - class InputGetMEModel(BaseModel): """Inputs of the knowledge graph API."""