requirements.txt

#
# This file is autogenerated by pip-compile with Python 3.11
# by the following command:
#
#    pip-compile
#
annotated-types==0.7.0
    # via pydantic
anyio==4.4.0
    # via httpx
appdirs==1.4.4
    # via pint
asttokens==2.4.1
    # via stack-data
async-property==0.2.2
    # via python-keycloak
attrs==24.2.0
    # via
    #   entity-management
    #   jsonschema
    #   referencing
blue-cwl==1.0.0
    # via bbp-workflow (setup.py)
bluepyefe==2.3.34
    # via bluepyemodel
bluepyemodel==1.0.17
    # via bbp-workflow (setup.py)
bluepyopt==1.14.15
    # via bluepyemodel
bluepysnap==3.0.1
    # via
    #   bbp-workflow (setup.py)
    #   brainbuilder
brainbuilder==0.20.1
    # via blue-cwl
brayns==3.9.0
    # via bbp-workflow (setup.py)
cached-property==1.5.2
    # via
    #   bluepysnap
    #   neurom
certifi==2024.8.30
    # via
    #   httpcore
    #   httpx
    #   requests
cffi==1.17.1
    # via cryptography
charset-normalizer==3.3.2
    # via requests
cheetah3==3.2.6.post1
    # via bbp-workflow (setup.py)
click==8.1.7
    # via
    #   blue-cwl
    #   bluepysnap
    #   brainbuilder
    #   entity-management
    #   fz-td-recipe
    #   morph-tool
    #   neurom
comm==0.2.2
    # via ipykernel
configparser==7.1.0
    # via bluepyemodel
contourpy==1.3.0
    # via matplotlib
cryptography==43.0.1
    # via jwcrypto
currentscape==1.0.15
    # via bluepyemodel
cycler==0.12.1
    # via matplotlib
deap==1.4.1
    # via bluepyopt
debugpy==1.8.5
    # via ipykernel
decorator==5.1.1
    # via
    #   ipyparallel
    #   ipython
deprecation==2.1.0
    # via
    #   morph-tool
    #   python-keycloak
docutils==0.21.2
    # via python-daemon
efel==5.7.9
    # via
    #   bluepyefe
    #   bluepyemodel
    #   bluepyopt
elephant==1.1.0
    # via bbp-workflow (setup.py)
entity-management==1.5.2
    # via
    #   bbp-workflow (setup.py)
    #   blue-cwl
entrypoints==0.4
    # via ipyparallel
executing==2.1.0
    # via stack-data
fasteners==0.19
    # via bluepyemodel
find-libpython==0.4.0
    # via neuron
flexcache==0.3
    # via pint
flexparser==0.3.1
    # via pint
fonttools==4.53.1
    # via matplotlib
fz-td-recipe==0.2.3
    # via blue-cwl
gitdb==4.0.11
    # via gitpython
gitpython==3.1.43
    # via bluepyemodel
h11==0.14.0
    # via httpcore
h5py==3.11.0
    # via
    #   bluepyefe
    #   bluepysnap
    #   brainbuilder
    #   hdmf
    #   pynwb
    #   voxcell
hdmf==3.14.4
    # via pynwb
httpcore==1.0.5
    # via httpx
httpx==0.27.2
    # via python-keycloak
idna==3.8
    # via
    #   anyio
    #   httpx
    #   requests
igor2==0.5.8
    # via bluepyefe
importlib-resources==6.4.4
    # via bluepysnap
ipykernel==6.29.5
    # via ipyparallel
ipyparallel==8.8.0
    # via
    #   bluepyemodel
    #   bluepyopt
ipython==8.27.0
    # via
    #   ipykernel
    #   ipyparallel
isodate==0.6.1
    # via rdflib
jedi==0.19.1
    # via ipython
jinja2==3.1.4
    # via
    #   bluepyemodel
    #   bluepyopt
joblib==1.4.2
    # via
    #   blue-cwl
    #   brainbuilder
jsonschema==4.23.0
    # via
    #   bbp-workflow (setup.py)
    #   blue-cwl
    #   bluepysnap
    #   brainbuilder
    #   fz-td-recipe
    #   hdmf
    #   luigi-tools
jsonschema-specifications==2023.12.1
    # via jsonschema
jupyter-client==8.6.2
    # via
    #   ipykernel
    #   ipyparallel
jupyter-core==5.7.2
    # via
    #   ipykernel
    #   jupyter-client
jwcrypto==1.5.6
    # via python-keycloak
kiwisolver==1.4.7
    # via matplotlib
libsonata==0.1.28
    # via
    #   bbp-workflow (setup.py)
    #   blue-cwl
    #   bluepysnap
    #   brainbuilder
    #   fz-td-recipe
lockfile==0.12.2
    # via python-daemon
luigi==3.5.2
    # via
    #   bbp-workflow (setup.py)
    #   blue-cwl
    #   luigi-tools
luigi-tools==0.3.4
    # via bbp-workflow (setup.py)
lxml==5.3.0
    # via
    #   brainbuilder
    #   fz-td-recipe
markupsafe==2.1.5
    # via jinja2
matplotlib==3.9.2
    # via
    #   bbp-workflow (setup.py)
    #   bluepyefe
    #   currentscape
    #   neurom
matplotlib-inline==0.1.7
    # via
    #   ipykernel
    #   ipython
more-itertools==10.5.0
    # via
    #   bluepysnap
    #   morph-tool
morph-tool==2.11.0
    # via
    #   blue-cwl
    #   bluepyemodel
    #   bluepysnap
morphio==3.3.9
    # via
    #   bluepyemodel
    #   bluepysnap
    #   brainbuilder
    #   morph-tool
    #   neurom
neo==0.13.3
    # via
    #   bbp-workflow (setup.py)
    #   bluepyefe
    #   efel
    #   elephant
nest-asyncio==1.6.0
    # via ipykernel
neurom==4.0.2
    # via
    #   bluepyemodel
    #   morph-tool
neuron==8.2.6
    # via
    #   bluepyemodel
    #   bluepyopt
nptyping==2.5.0
    # via pynrrd
numpy==1.26.4
    # via
    #   blue-cwl
    #   bluepyefe
    #   bluepyemodel
    #   bluepyopt
    #   bluepysnap
    #   brainbuilder
    #   contourpy
    #   currentscape
    #   deap
    #   efel
    #   elephant
    #   fz-td-recipe
    #   h5py
    #   hdmf
    #   igor2
    #   libsonata
    #   matplotlib
    #   morph-tool
    #   morphio
    #   neo
    #   neurom
    #   neuron
    #   nptyping
    #   pandas
    #   pint-xarray
    #   pyarrow
    #   pynrrd
    #   pynwb
    #   quantities
    #   scipy
    #   voxcell
    #   xarray
packaging==24.1
    # via
    #   deprecation
    #   ipykernel
    #   matplotlib
    #   neo
    #   neuron
    #   xarray
palettable==3.3.3
    # via currentscape
pandas[pyarrow]==2.2.2
    # via
    #   bbp-workflow (setup.py)
    #   blue-cwl
    #   bluepyemodel
    #   bluepyopt
    #   bluepysnap
    #   brainbuilder
    #   fz-td-recipe
    #   hdmf
    #   morph-tool
    #   neurom
    #   pynwb
    #   voxcell
    #   xarray
parso==0.8.4
    # via jedi
pebble==5.0.7
    # via bluepyopt
pexpect==4.9.0
    # via ipython
pickleshare==0.7.5
    # via bluepyopt
pillow==10.4.0
    # via matplotlib
pint==0.24.3
    # via pint-xarray
pint-xarray==0.4
    # via bbp-workflow (setup.py)
platformdirs==4.3.2
    # via jupyter-core
prompt-toolkit==3.0.47
    # via ipython
psutil==6.0.0
    # via
    #   ipykernel
    #   ipyparallel
ptyprocess==0.7.0
    # via pexpect
pure-eval==0.2.3
    # via stack-data
pyarrow==17.0.0
    # via
    #   bbp-workflow (setup.py)
    #   blue-cwl
    #   pandas
pycparser==2.22
    # via cffi
pydantic==2.9.1
    # via blue-cwl
pydantic-core==2.23.3
    # via pydantic
pygments==2.18.0
    # via ipython
pyjwt==2.9.0
    # via entity-management
pynrrd==1.0.0
    # via voxcell
pynwb==2.8.1
    # via efel
pyparsing==3.1.4
    # via
    #   matplotlib
    #   rdflib
python-daemon==3.0.1
    # via luigi
python-dateutil==2.9.0.post0
    # via
    #   entity-management
    #   ipyparallel
    #   jupyter-client
    #   luigi
    #   matplotlib
    #   pandas
    #   pynwb
python-keycloak==4.3.0
    # via entity-management
pytz==2024.1
    # via pandas
pyyaml==6.0.2
    # via
    #   bluepyemodel
    #   brainbuilder
    #   fz-td-recipe
    #   neurom
pyzmq==26.2.0
    # via
    #   ipykernel
    #   ipyparallel
    #   jupyter-client
quantities==0.15.0
    # via
    #   elephant
    #   neo
rdflib==7.0.0
    # via
    #   entity-management
    #   sparqlwrapper
referencing==0.35.1
    # via
    #   jsonschema
    #   jsonschema-specifications
requests==2.32.3
    # via
    #   entity-management
    #   python-keycloak
    #   requests-toolbelt
    #   voxcell
requests-toolbelt==1.0.0
    # via python-keycloak
rpds-py==0.20.0
    # via
    #   jsonschema
    #   referencing
ruamel-yaml==0.18.6
    # via hdmf
ruamel-yaml-clib==0.2.8
    # via ruamel-yaml
scipy==1.14.1
    # via
    #   bluepyefe
    #   bluepyemodel
    #   brainbuilder
    #   efel
    #   elephant
    #   hdmf
    #   morph-tool
    #   neurom
    #   voxcell
sh==1.14.3
    # via bbp-workflow (setup.py)
six==1.16.0
    # via
    #   asttokens
    #   elephant
    #   isodate
    #   python-dateutil
smmap==5.0.1
    # via gitdb
sniffio==1.3.1
    # via
    #   anyio
    #   httpx
sparqlwrapper==2.0.0
    # via entity-management
stack-data==0.6.3
    # via ipython
tenacity==8.5.0
    # via luigi
tornado==6.4.1
    # via
    #   ipykernel
    #   ipyparallel
    #   jupyter-client
    #   luigi
tqdm==4.66.5
    # via
    #   bluepyemodel
    #   brainbuilder
    #   elephant
    #   ipyparallel
    #   neurom
traitlets==5.14.3
    # via
    #   comm
    #   ipykernel
    #   ipyparallel
    #   ipython
    #   jupyter-client
    #   jupyter-core
    #   matplotlib-inline
typing-extensions==4.12.2
    # via
    #   efel
    #   flexcache
    #   flexparser
    #   ipython
    #   jwcrypto
    #   luigi-tools
    #   pint
    #   pydantic
    #   pydantic-core
    #   pynrrd
tzdata==2024.1
    # via pandas
urllib3==2.2.2
    # via requests
voxcell==3.1.9
    # via
    #   bbp-workflow (setup.py)
    #   blue-cwl
    #   brainbuilder
wcwidth==0.2.13
    # via prompt-toolkit
websockets==13.0.1
    # via brayns
xarray==2024.7.0
    # via
    #   bbp-workflow (setup.py)
    #   pint-xarray
xmltodict==0.13.0
    # via morph-tool

# The following packages are considered to be unsafe in a requirements file:
# setuptools